Gene Gbem_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0782 
Symbol 
ID6783616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp917249 
End bp918403 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content58% 
IMG OID642766753 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002137603 
Protein GI197117176 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTGT GTGTGGCAAT GCTTATCGCT TCGGAGTTCA TGCCGGTCAG CCTGCTGACA 
CCGATTGCAG CCGATCTGGG TGCGACTGCC GGAATGGCGG GCCAAGCCAT CTCCATTTCG
GGTCTCTTCG CAGTGGTAAC CAGCTTGTTC ATCGCAACCA TCGCAGGGCG CATAGATCGC
CGCCATTTGC TGATGGGGTT GACGGGTCTG ATGTTGGCTT CGTTGATACT GATCGCGGAG
GCCTCAAGCT TTGGCATGCT GATGATTGCC CGCGCGGTTC TGGGTATGGT GGTCGGTGGA
TTTTGGGCGC TGGCCACGGC AACGATTATG CGCCTGGTTC CGAAGGACGC AGTCCCCAAG
ACGTTGGGGG CCATGTACAC GGGCAACGCT TTAGCCACCA CCTTTGCCGC GCCCATCGGC
AGCTACCTCG GAGGCATCAT CGGCTGGCGC GGCGTCTTCT GGGCGCTTGT GCCCATAGTA
GTGCTGAATC TGATCTGGCA ATGGATAAGC CTGCCGTCCA TGCCTCCACA AACCGCTAAC
CCTGTTGGTA AAGTCTTTGG CCTGTTGCAA CGACGCAATG TCGCCTTCGC CATGGCGGGC
GTAATGCTCT CCTTTGCCGG CGCCTTCGGC GTATTCACCT ATATGCGGCC CTTTCTTGAA
GCTTACACAC GGGTAAGCGT GCCCCAACTG TCTCTGCTCT TGCTTGCGAT GGGAGGGGCT
GGATTTGTCG GCACATACGG AGCCACAGCA CTGCTTGAGC GTCATCTTTA CTCGTTGCTC
AGGTTGTTAC CCCTGGCACT AGGTGTGGTG ACGATTGGCC TGCTGTCGGT TGGACATGTT
CTATGGGGAG TCGCGGCCAT GCTGATTGCC TGGGGGACAC TGAACTCGGC CATTCCGGTG
TCGTGGTCCG CCTGGCTGGC TAAAGGTATC AGCGACGAAC CGGAAAGCGG CGGCGGGTTG
ATCGTGGCAG CGATTCAGCT CTCGATCATG CTGGGGGCAG CGTTCGGCGG TTTGCTCCTG
GACCATATTT CGATTGCGGC AACGCTGATC GGTGGCGCAG TTCTTCTCGT TCTTGCGTCG
CTGATAATCG GTAATGGCGA CCGCATCAGA TCAAGCGTAG GAGCAAACGG GCAGGCGGTT
AATCCTCTCC GTTAG
 
Protein sequence
MSLCVAMLIA SEFMPVSLLT PIAADLGATA GMAGQAISIS GLFAVVTSLF IATIAGRIDR 
RHLLMGLTGL MLASLILIAE ASSFGMLMIA RAVLGMVVGG FWALATATIM RLVPKDAVPK
TLGAMYTGNA LATTFAAPIG SYLGGIIGWR GVFWALVPIV VLNLIWQWIS LPSMPPQTAN
PVGKVFGLLQ RRNVAFAMAG VMLSFAGAFG VFTYMRPFLE AYTRVSVPQL SLLLLAMGGA
GFVGTYGATA LLERHLYSLL RLLPLALGVV TIGLLSVGHV LWGVAAMLIA WGTLNSAIPV
SWSAWLAKGI SDEPESGGGL IVAAIQLSIM LGAAFGGLLL DHISIAATLI GGAVLLVLAS
LIIGNGDRIR SSVGANGQAV NPLR