Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0622 |
Symbol | |
ID | 6783455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 742520 |
End bp | 744151 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642766595 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_002137446 |
Protein GI | 197117019 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACATGT CGCAGTACAA AAGCCTCTTC CTCTCCGAGA GCAGGGAGTA CCTGAAGACC ATCTCCGACC AGGTGGTCGC CTTGGAGCAG GCTCCTGCCG AGAGAAGCGC CGTCGACGCC CTCTTCAGGG GAGCCCATTC GCTCAAGGGG ATGGCCGCCT CTATGGAGTA CGGCGACGTC GTGGTGGTGG CGCACAGCAT GGAAGACCTG ATGGCGCGGG TCCGGGACGG TGCCCTTTGC TTCGAGGCCG GGGTGGCCGA TCTGCTCCTG GAGGGTGTGG ACCTGATCGA CGTCATGCTG GCCGACGTGG AGGCGGACCG GGAATGCACC CGCCCTCCCG ACGACTTCGC GGAGAGGCTC CGGGGTTACA CGCCGGCTCT CCCGAAAAAG CAAGCGCCCG CGGGGGAGCC CCCGGCGGAG CACCCAGCGC CCCAGGCGGC GCAGCCGGGA GGCGAACCCG AGAAGGCCAA GGAGCCGGCC GGCGAGGCGA GCGGCACGGT GCGGGTGAAG ACGGAGCTTC TGGATCACCT GATCAACCTG ACCGGCGAGC TGGTCACCAA CAAGCACCGG CTGTTGAACG TGGCGCAGGA GGTGGCAAGC CCCGCCTTGA ACGACGCGGT CTCCGAGACC GGGAAGCTTC TGCGCGCCCT GCACGACGAG GTCATGAAGG TGCGCCTGAT GCCCTTCGAG GCGATCTGCG ACCGCTTCCA GCGCTCGGTC CGAAGCCTCG CCAAGAAAAG CGGCAAGGAA ATCAACTTCG AGCTGTCCGG CCGCGAGATC GGCATGGACC GCGGCATGCT GGAGCAGTTG GTCGATCCGC TGAACCACAT CCTGAGAAAC GCCGTGGACC ACGGCATGGA GGAAAGCGCA GAGCGGGCGG CGCAGGGCAA GCCCCCCCGC GGGACGGTGA AGCTCTCCGT TTCCCGCGAC CGTGACCGCA TATCGATCCA GGTAAGCGAC GACGGCCGGG GGATGGAACC GCAGAAGATG ATTGAAGCGG CCGTCGCCAA GGGGGTGATC ACCCCGGAAG AAGGGGCGCT CCTGTCGCCG CGCCAGGCGC TGATGCTCTC CTGCATCCCG GGCTTCTCGA CCGCCAAGGT CGTCACCGAC ATCTCGGGGC GCGGCGTCGG CATGGACGCG GTGAACGCGG CCATCCAGAA GCTTGGGGGA ACCCTGGTGA TAGAGAGCGA GCCCGGACAG GGAAGCACCT TCACGCTCAG GCTCCCCATG ACCATCGCCA TCATCCACGC GCTGGTGGTG CAGTGCGGCA ACGTGAAAGG GGCGGTCCCG GTGACGGGGG TGCTGCGCAC CGTCGAGCTG GCGCGCCACC AGATCGAAAC CATGGGAAAG CGGCAGATGT TCCAGCTGGA CGGCGAGGCC ATCCCGCTTT TGAGCCTGAA CCGGATACTG GGCCTGCCGC TGGGGCGTTT CCCCAACGGG ATCCTGCCGC TCTTCGTCAC CGAGGCGAAG GGGAGGCGGG TCGGCATCGT GGTGGACCGC TTTCTAGGGC AGCACGAACT CTTCGTAAAA CCTTTCGGCA GGCCTTTATG CAAGATGGCC GGACTCGCCG GCGGGGCGAC GCTCGGGGAC GGAGAAATCG TCACCATCCT CGACCTGGCC GGCCTGTTGT GA
|
Protein sequence | MDMSQYKSLF LSESREYLKT ISDQVVALEQ APAERSAVDA LFRGAHSLKG MAASMEYGDV VVVAHSMEDL MARVRDGALC FEAGVADLLL EGVDLIDVML ADVEADRECT RPPDDFAERL RGYTPALPKK QAPAGEPPAE HPAPQAAQPG GEPEKAKEPA GEASGTVRVK TELLDHLINL TGELVTNKHR LLNVAQEVAS PALNDAVSET GKLLRALHDE VMKVRLMPFE AICDRFQRSV RSLAKKSGKE INFELSGREI GMDRGMLEQL VDPLNHILRN AVDHGMEESA ERAAQGKPPR GTVKLSVSRD RDRISIQVSD DGRGMEPQKM IEAAVAKGVI TPEEGALLSP RQALMLSCIP GFSTAKVVTD ISGRGVGMDA VNAAIQKLGG TLVIESEPGQ GSTFTLRLPM TIAIIHALVV QCGNVKGAVP VTGVLRTVEL ARHQIETMGK RQMFQLDGEA IPLLSLNRIL GLPLGRFPNG ILPLFVTEAK GRRVGIVVDR FLGQHELFVK PFGRPLCKMA GLAGGATLGD GEIVTILDLA GLL
|
| |