Gene Gbem_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0618 
Symbol 
ID6783451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp738968 
End bp740314 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content59% 
IMG OID642766591 
ProductMiaB-like tRNA modifying enzyme YliG 
Protein accessionYP_002137442 
Protein GI197117015 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.54849e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGAGA AGACTAAGGA AAAAGTGAGC CTGGTGAGCC TGGGCTGCCC GAAGAACCTG 
GTGGATGCCG AGGTGATGCT CGGCTACCTG TCGCAGGACG AGTACGAGGT TACCACCGAC
GAGACCCAGG CGGATATCAT CGTGGTCAAC ACCTGCTCCT TCATAAAAGA GGCGAAACAG
GAGAGCATCG ACACCATCCT GGACCTGGCC GACAGGAAGC ATGACGCACG CTGCAAGCTG
CTCATCGTCA CCGGCTGCCT CCCCCAGCGC TACCAGCAGG AACTCGCCAA GGAGCTCCCC
GAGGTCGACA TCTTCATCGG TACCGGCGAC TACCCGCGCA TCGCGGAGAT CATCGCCGAG
AAGAAGCAGA CCGAGGAGCA GCTCTGCTAC ACCGGGGATC CCAACTTCGT CTACAACGAC
GAGGTCCCGC GGCTTCAGTC GTCGCCGCAC TACACGGCCT ATCTGAAGAT AGCCGAGGGA
TGCTCCAACA ACTGCTCTTA CTGCGTCATC CCGTCTCTGC GCGGCGGCCA CCGCTCGCGC
CCGCTGGCGA CGCTTCTGGC CGAGGCGAAG GCGCTGGTCG AGGGAGGGGT CAAGGAGCTG
AACCTGATCG CCCAGGACAT CACCGCCTAC GGCCGCGACC TGGAGGGAAA ACCGAGCCTG
GAGCTTCTGA TCAAGGAACT GGTCAAGATG GAGAAGCTCA AGTGGATCAG GCTTTTGTAC
GCCTATCCCG ACGGGGTGAC CGACTCGCTG ATCCAGCTCA TCAAGGAGGA GCCCAAGGTC
TGCAAGTACC TCGACCTCCC CATCCAGCAC ATCAGCGACC CGGTGCTCTC CAACATGAAA
CGCAGAAGCG GCGAGGCCGA GATCAGGACC CTGATCTCCA AGCTGCGCCG CGAGATACCG
GACATCGCCA TCAGGACCTC GCTCATCGTC GGCTTCCCGG GCGAGACCAC CGACGACTTC
AAGAAGCTCT TGCAGTTCGT CGAGCAGACC CGCTTCGATC GCCTCGGGGT CTTCTGCTAC
TCCAGGGAGG ATGGGACCCC TGCGGCGGAG ATGCCGGACC AGGTGTCCGA GCGGATCAAG
AGGGAGCGCC ACAAGAAGCT GATGCGGACC CAGGCACGCG TTTCCTTCAA GCACAATAGG
ACCTTGGTTG ACAGTGAAGA GGACGTATTA GTTGAAGGTT ACAGCGAAGA AACTGAGCTC
TTGCTCAAAG GTCGTTCCTC ACGGCAAGCA CCTGATGTCG ATGGTCTGGT GTATATCACT
GCAGGTAATG CCAACGTCGG TGACATAGTG AGATTGAAGA TTACTGATTC CTCTGATTAC
GACTTGATAG GTGAAATCGT AGACTAG
 
Protein sequence
MSEKTKEKVS LVSLGCPKNL VDAEVMLGYL SQDEYEVTTD ETQADIIVVN TCSFIKEAKQ 
ESIDTILDLA DRKHDARCKL LIVTGCLPQR YQQELAKELP EVDIFIGTGD YPRIAEIIAE
KKQTEEQLCY TGDPNFVYND EVPRLQSSPH YTAYLKIAEG CSNNCSYCVI PSLRGGHRSR
PLATLLAEAK ALVEGGVKEL NLIAQDITAY GRDLEGKPSL ELLIKELVKM EKLKWIRLLY
AYPDGVTDSL IQLIKEEPKV CKYLDLPIQH ISDPVLSNMK RRSGEAEIRT LISKLRREIP
DIAIRTSLIV GFPGETTDDF KKLLQFVEQT RFDRLGVFCY SREDGTPAAE MPDQVSERIK
RERHKKLMRT QARVSFKHNR TLVDSEEDVL VEGYSEETEL LLKGRSSRQA PDVDGLVYIT
AGNANVGDIV RLKITDSSDY DLIGEIVD