Gene Gbem_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0588 
Symbol 
ID6783421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp707993 
End bp708934 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content61% 
IMG OID642766561 
ProductGeneral secretion pathway protein K 
Protein accessionYP_002137412 
Protein GI197116985 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGGGG AAAAGGGATT CGCCCTGGTG ATAACCCTGA TCGTCACGGC CCTGCTCGTG 
GCGCTCCTGG TGGAGTTCGT GAACGAGGTC TACGTCGACA CCTCGCATAG CCACAACTTC
GTCGCCTCGC AGCAGGCGGG GATACTGGCG GAGTCGGGGG TAGCCGGGGG GATCAAGCTG
CTGCAGCTCT CCAGCGCGAT GAGGCTGAAC GAGCCGTACA GCTCCCTTCT GGAGCCGTGG
GCGAAGCCGC AGTCTTTCCA GGCGGATGAC GGCACGGTGA CCATCACCAT CGAAGAGGAG
ACCGGGAAGC TCAACATCAA CACGGCGACC TCGGCCAACG GCACTGCGGC CCCCTATTAC
ACTCCGATGC TGCTCCGCCT CCTCACCAGG CTGAAGCTCA GCACCGACCT CGCCGACTCG
CTTATGGACT GGGTGGACGA AAACGATAAT CCGCTCCCCG GAGGGGCCGA GAGCAACTAC
TACGGAACCC TGAAGCTCCC CTACGCAGCC AAGAACAAGA GACTGGAAAC GGTGGACGAG
CTCGCGCTGG TAAAGGGTTT CACCCCGGAG ACGCTGACGA CCCTTAAATC GCTGGTGACC
GTGTACGGCA ACAGCAACGA GTTGGAGCCG GCCACTCTGA TAAACGTCAA TACGGCGCCC
AAAGAGGTGC TGGCGGCTCT GGACGAAAGG ATGAGCGACG ACCTGGTGCA AAGGATCCTC
GACTTCCGCA AGACCAGGCC GATCAAGGGA ATGGCGGATT TCAATTCGAT ACCCGGAATG
GACTCGATGC TCCCCAAGTT CTCGGACAAA ATCACCTTCG GCGGCAGCGT GTACCGGATC
CGCTCCGAAG GAAAAGTGGG CGAAAGCGTG GCCGTGGCCG AGGCCGTGGT CCGCACCAGT
GGTAGTGCGA CACCAGCAGT TCTTTATTGG AGAGAGTATT GA
 
Protein sequence
MRGEKGFALV ITLIVTALLV ALLVEFVNEV YVDTSHSHNF VASQQAGILA ESGVAGGIKL 
LQLSSAMRLN EPYSSLLEPW AKPQSFQADD GTVTITIEEE TGKLNINTAT SANGTAAPYY
TPMLLRLLTR LKLSTDLADS LMDWVDENDN PLPGGAESNY YGTLKLPYAA KNKRLETVDE
LALVKGFTPE TLTTLKSLVT VYGNSNELEP ATLINVNTAP KEVLAALDER MSDDLVQRIL
DFRKTRPIKG MADFNSIPGM DSMLPKFSDK ITFGGSVYRI RSEGKVGESV AVAEAVVRTS
GSATPAVLYW REY