| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0489 |
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| Symbol | |
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| ID | 6783318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 590464 |
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| End bp | 591822 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642766459 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_002137314 |
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| Protein GI | 197116887 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAA AGGACAAGAA AATACTGGTG GTGGGACTGG CGAAGACCGG CGTGGCGGTG
ACCCGCTTCC TGGCGCAAGC CGGTGCCTTC GTCACCGTTA CCGACATGCG GGAGGAGGAG
GCGCTCTCCG ACGTTCTGGC CGAGCTCTCC GACCTGGATA TTACCTACGA ACTCGGGCGC
CACGTCCCCT ACAGCTTCCT TATGGCGGAT CTGATCGTGG TCTCACCCGG CGTCCCCATG
GACATAAAGC CGCTGGAGAT GGCCCGCTCG CAGAAGCGGC GCGTGGTGAG CGAGGTGGAA
CTCGCCTCCT GGTTCATCAA GGCCCCCATG GTCGCCATCA CCGGGACCAA CGGCAAGACC
ACGACGACGA CCCTTACCGG CGAGATCTTC AAGGCCTGCG GCTTCGAGAC CTTCGTGGGG
GGGAACATCG GCAATCCCCT GATCGAGCTG GCCGAAAGCG GCCAGGAGGT ATCAAGGGTG
GTGGTGGAAC TCTCCTCCTT CCAGCTGGAA GGGGTGGAAA GCTTCCGGCC GGACGTGGCG
GTGCTTTTGA ACATCACCGA GGACCACCTG GACCGCTACC ACAGCTTCCA GGAGTACATC
GACGCGAAGC TCCGCATCTT CGAGAACCAG ACCGCGGACG ACTTCGCCGT CCTCAACATC
GACGACCCGC TGGTCGCTGC CTGCGCCTCC AAGCTCAAGG CGCAGCTCTT CCCCATGAGC
CGCCTGCACG AGCTGGAAGA AGGGATCAGC TACCGCGACG GCTTCATCAC CTTCTCCCAC
AAGGGGAAAG TGCTCCGCTT CGGCACCGAG GGGTTCAAGC TGAAGGGGGT GCACAACCTG
GACAACATCA TGGCGAGCCT TGCCTCCACC CTCCTCATGC GCTGCGACGG CGACTGCGCC
TACGAGGCGG TGAAGAACTT CAAGGGGCTG CCGCACCGGA TGGAACTGGT GGAAGAGATC
GACGGCGTCG CCTACTACGA GGACAGCAAA GGGACCAACG TCGGGAGCGT GGTGAAGTCG
CTGGAGAGCT TCGACTCCGG CATCACCCTC ATCGCCGGCG GCAAGGACAA GGGAGGCTCC
TATGAGCCCC TGGCCCCCCT GGTCGAGAGC CGAGTGAGCC ACCTGGTGCT GATCGGCGAG
GCGAAGGCAC GCATGAACGA GGCGCTAGGC TCCTTGACCG ATACCCATCT CGCCGAAACC
CTCGAGGAGG CGGTGGAGAT CTCGCGCAGG CTGACCAAGC CGGGCGGGGT GGTGCTTTTC
TCGCCGGCCT GCTCCAGCTT CGACATGTTC AAGAACTACG AGGAGCGCGC CCAGCGCTTC
AAGGCCGCGG TGCGCGCCGG CAAGAAGGGG GAGGCGTGA
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| Protein sequence | MELKDKKILV VGLAKTGVAV TRFLAQAGAF VTVTDMREEE ALSDVLAELS DLDITYELGR
HVPYSFLMAD LIVVSPGVPM DIKPLEMARS QKRRVVSEVE LASWFIKAPM VAITGTNGKT
TTTTLTGEIF KACGFETFVG GNIGNPLIEL AESGQEVSRV VVELSSFQLE GVESFRPDVA
VLLNITEDHL DRYHSFQEYI DAKLRIFENQ TADDFAVLNI DDPLVAACAS KLKAQLFPMS
RLHELEEGIS YRDGFITFSH KGKVLRFGTE GFKLKGVHNL DNIMASLAST LLMRCDGDCA
YEAVKNFKGL PHRMELVEEI DGVAYYEDSK GTNVGSVVKS LESFDSGITL IAGGKDKGGS
YEPLAPLVES RVSHLVLIGE AKARMNEALG SLTDTHLAET LEEAVEISRR LTKPGGVVLF
SPACSSFDMF KNYEERAQRF KAAVRAGKKG EA
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