| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0379 |
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| Symbol | |
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| ID | 6783204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 454465 |
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| End bp | 456408 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642766346 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002137204 |
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| Protein GI | 197116777 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGAAA GCCGCGACAA CCATAGCTTC GCCTTTTTGG AGCAGAAGGT CGAGGAGCGA
ACCCGCGAGT TGAAACAGGA GATCCAGGAG CGCCTGCGCG CCGAAGGGCA ACTGGCCGAG
GCGCGGGACC ACTACCTGAA CATCCTGGCC GAGGCCCCCG CTCTGATCTG GCGTGCCGAC
ACGCAGGCCA AGTGCGACTG GTTCAACCAC ACCTGGCTTT CTTTCACCGG CCGCACCATG
GAAGAGGAAT ACGGCGACGG CTGGGCACAG GGGGTCCACC CCGACGACCT GGAGCGCTGC
GTTGCCATCT GGCTTGGGGC GTTTCACCAG AAGGCCCCGT TCGAAATGGA GTACCGGCTG
CGACGCCACG ACGGCGTATT CCGCTGGATC CTGGACATCG GCCGGCCCTT CTCCGGGCTC
GACGGCAGCT TCGCCGGGTA TATCGGTTAC TGCTTCGACA TCACCGACCG CAAGGGTGCG
GAGATGGAGC TGGTATTGGC AAGAGAAGCC GCCGAGGCTG CCAGTAAAGC GAAGACCGAG
TTCCTGGCCA ACATGAGCCA CGAGATCCGC ACCCCGATGA ACAGCATCAT CGGGATGACG
CAGCTTCTGG CCTACACTGA GCTTTCAGCC GAGCAGAAGG AGTACGTCGA GGGAATCCTC
ACCTCTTCGG AGGGTCTCCT TGCTATCATC AACGACATCC TCGATCTTTC GAAAGTGGAG
GCGGGGAAGA TCGAACTGGA GTCGCGGAAT TTCAGCCTCA GGCAGAGCAT CAACGAAATC
ATCAGGACCC AGACGGCGGC GGCCCACGAA AAGGGGCTCC AGCTGAAAGT CAGTATCCCT
GAAGAGATCC CCGATGCGGT GGTCGGCGAC CGGCTAAGGC TAAAGCAGGT GCTACTCAAC
ATCATCGGCA ACGCGATCAA GTTCACCGCA AGCGGGAGCA TTGCGGTAAC GGTAGCGCTG
GCGGAAAAAA AAGAGGAAGC GGCCCGCATC ACATTCAGCG TCACCGATAC CGGCATCGGG
ATAGCGCCGG AGTCCCTGGA CCGCATCTTC GCCCCGTTCG CGCAGGAAGA CACCTCCACC
ACCCGGAGGT ACGGCGGCAC CGGTCTTGGG CTTTCCATCA GCACGAAGCT GGTCCGGCTC
ATGGGGGGAC GGATCTGGGC GGAAAGCCGC AAGAACGCCG GCAGCACCTT CCACTTTGAG
ATCCCCTTCC GGCTCTGCGC CAAAAAGGCC CGCCCCAAGG CGTCCCTCAA TACCGCCAAG
AAAGCCGTCT GGGACGGGGC CAAGCTCCGC ATCCTGCTGG CCGACGACCA GGAGATGAAC
CGCAACATTA TGGAGAAACT CCTGGGGCGA CTGGGGCACG ATCTGGAAAG TGCGGCGGAT
GGCGGCGAGG CGCTAGGAAA ATGGGAAAAG GGGAACTTCG ACCTCATCCT CATGGATGTC
GAGATGCCCG GTATCGACGG CACGGAAGCG ACCCGCGTGA TCCGAGAGAC CGAGACCCCG
CTGGGAAAGC GGACCCCCAT CATCGCCCTC ACCGCCCATG CGCTTAAGAG CCACCAGGAG
ATGCTTCTCG GACTAGGCTA CGACGGGTAC GTACCCAAGC CTGTGGAGAT TCCCACGCTG
TTGCAGGAGA TGAAGCGCTG TCTGCACCTG CCCGACCTTG ACACAGCAGG CAACGGCGAC
GCCGCCGACG GAGTTCCCAT GACTCCCGCG GCAAACCAGC TTGGCACAGT GGACAGGCAG
CAGCTTGCGG ATATACTCAC TGCAGTCAGC TCACTGTTGC GTCAAAGAAA CATGAAGGTC
ATAGACAAGG TAAATGACCT CTCCGCACTG ATTCCCGGTT CACCTCTTCT AGAACAGCTG
AACCAGCAGA TACGGCAATT CGATTGCCAA AGCGCTCTTA ATACAGTCGG ACAAATCCTC
CTGAATTACG ACATCCACTC CTGA
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| Protein sequence | MDESRDNHSF AFLEQKVEER TRELKQEIQE RLRAEGQLAE ARDHYLNILA EAPALIWRAD
TQAKCDWFNH TWLSFTGRTM EEEYGDGWAQ GVHPDDLERC VAIWLGAFHQ KAPFEMEYRL
RRHDGVFRWI LDIGRPFSGL DGSFAGYIGY CFDITDRKGA EMELVLAREA AEAASKAKTE
FLANMSHEIR TPMNSIIGMT QLLAYTELSA EQKEYVEGIL TSSEGLLAII NDILDLSKVE
AGKIELESRN FSLRQSINEI IRTQTAAAHE KGLQLKVSIP EEIPDAVVGD RLRLKQVLLN
IIGNAIKFTA SGSIAVTVAL AEKKEEAARI TFSVTDTGIG IAPESLDRIF APFAQEDTST
TRRYGGTGLG LSISTKLVRL MGGRIWAESR KNAGSTFHFE IPFRLCAKKA RPKASLNTAK
KAVWDGAKLR ILLADDQEMN RNIMEKLLGR LGHDLESAAD GGEALGKWEK GNFDLILMDV
EMPGIDGTEA TRVIRETETP LGKRTPIIAL TAHALKSHQE MLLGLGYDGY VPKPVEIPTL
LQEMKRCLHL PDLDTAGNGD AADGVPMTPA ANQLGTVDRQ QLADILTAVS SLLRQRNMKV
IDKVNDLSAL IPGSPLLEQL NQQIRQFDCQ SALNTVGQIL LNYDIHS
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