| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0365 |
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| Symbol | |
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| ID | 6783191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 441203 |
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| End bp | 443881 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642766334 |
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| Product | DNA polymerase I |
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| Protein accession | YP_002137192 |
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| Protein GI | 197116765 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGACTG AAACAGAGAC GCTGTACCTT CTGGACGGCT CTTCCTACAT ATACCGCGCC
TATTTCGCCA TCAGGCACCT CTCCTCCCCC AGCGGTTTTC CCACCAACGC GCTCTACGGC
TTCACCCAGA TGCTTCTTAA GGTGATGAAG GACCGGGCTC CCGCCCACGT CGCCGTCATC
TTCGACGCCG GCAAGATCAC CTTCAGAAAC GAGCTCTTCC CCGCCTACAA GGCGACCAGG
AGCGCCATGC CGGAGGACCT GGCCCAGCAG ATCGAGCCGA TCAAGCAGAT GGTGCGCGCC
TTCAACATCC CGGCGCTGGA GCTGCCGGGG TTCGAGGCGG ACGACATCAT CGGGACCATC
GCCAAGAAGT GCGAGGCTCA AGGGATGGCC TGCGTCGTTG TGACCGGCGA CAAGGACCTG
ATGCAGATCG TCTCCGACCG GGTCACCCTG CTCGACACCA TGAAGGAGAA GAGCTTCGGC
ATAGCCGACG TGTACGAGAA GTTCGGGGTG GCGCCGGAGC GTGTGGTGGA CGTGCTGGCG
CTTTGGGGTG ACGCTTCCGA CAACATCCCC GGCGTCCCCG GCATCGGCGA GGTGACGGCC
AAGAAGCTCT TGCAGGAATT CGGCTCTCTG GACGAGCTTC TGGCCCGCGC CGGCGAGGTG
AAGGGGAAAA ACGGCGAGAG GCTCGTGGAG TTCGCCGACC AGGCGCGCCT ATGCCGCACC
CTTGCCACCA TCGACTGCAA CGTCCCCATC GAGTACAGCG TCGACGACTT CGCGGTGACT
CCGCCGGACA ACCGCCGCCT GGCGGCCCTG TTCCGGGAGT ACGGCTTCGT GACCCTCTTG
AAGGACCTGA CCAGCTCTCC CACCCTCTCC TGCGACCGTT ACTCGCTGGT CCTTACCGAG
GAGGAGCTGC GCCGCGTGGT GGCCGAGCTG GAGGCGGCCC CCGCCTTCGC CATCGACCTG
GAGACCACGA GCCTGAACCC CAGGGAGGCG CGGGTCGTGG GATACGCGGT CAGCTGCCGG
CCGCACGAGG CCCGGTACAT CCCGGTCGGG CACCGCTATC TCGGGGCTCC GGAGCAGCTT
CCCGAGGCCC TGGTGCTTGA GATCCTCGGG CCGCTTCTGA AGGACCCGGC GCGCCGCAAG
ATCGGCCAGA ACCTGAAGTA CGACTACCAG GTGCTCCGGA TGGCGGGGTT CGAAATGGAG
GGGATCTGGT GCGACACCAT GCTGGCCGCC TACCTGGTCA ACCCGGCGCG CAACAGCCAG
GGGCTGGACG CCCTGGCCTT GGAGTACCTG GACCACCGCA TGATCTCGTA CGCGGAGGTG
GCGGGGAGCG GCAAATGCGA GCTGAACTTC TCCGAGGTGG ATTTGGACCG TGCTGGCCCC
TACTCCTGCG AGGACGCCGA CGCCACGTAT CTCTTGCACG AGATACTGCT CCCCAAGGTG
CGGGAGCAGG GGATGGAAGA GCTCCTGTTC GACTTGGAGA TGCCGCTGAT GCGGATTCTG
GCCGATATGG AGCTCCACGG GGTGAAGCTG GACGTTGACC TCATGAAGGA GCTTTCCGCC
GGTTTCGGCA AACAGCTGAT CGAGCTGGAG GCGCAGATCC ACGAGCACTG CGGCGGCCCC
TTCAACATCA ACTCCCCCAA ACAGCTGGGG GAGATGCTTT TCGAGCGTAT GGGGCTTGCC
GTCGGGAAAA AAACCAAGGG GAAGACCGGC TGGTCCACCA ACGTGGAGGA GCTGGAGCGG
CTGGCCGAGG AGCACGAGGT GGCGCGGCTC CTTTTGCAGT ACCGAAGCAT CTCGAAGCTG
AAGTCGACCT ATACCGACGC GCTCCCCAAA CTGGTCGATC CTGCCACCGG CCGCGTGCAC
ACCTCCTATA ACCAGGCGGT GACCAGCACC GGCAGGCTCT CCTCCAGCGA CCCCAACCTC
CAGAACATAC CGATCCGGGG CGAAGAGGGG CGCGGCATCA GGCGCGCCTT CATCGCGGAG
CCGGGGAGCC TCATGCTTTC CGCCGATTAC TCCCAGATCG AGCTCAGGGT GCTGGCGCAC
CTCTCCGGCG ACCGTGTCCT CTGCGAGGCC TTCGCCGCCG GCGAGGACAT CCATCGCCGC
ACCGCGTCCG AGGTGTTCGG CATGTTCCCG GAGCTGGTGA CCTCCGAGAT GAGGCGCCAG
GCCAAGGTGA TCAACTTCGG CGTCATCTAC GGCCAGGGGG CCTTCAGCCT CGCCAAGGAG
CTGGGGGTGA CCCCCAAGCA GGCAAAGGCT TTCATCGACA GCTACTTCGA GCGCCACAGC
GGCGCGCGGA GCTTTCTGGA CAGCTGCATC AGGGAAGCGG AGGTCTGCGG CTTCGTCACC
ACCATAATGG GGAGACGGCT CTGCATCCCC GAGATAGCCA GCAAAAACGG CAACGTGCGC
GCCTTCGCCC AGAGAAACGC GGTTAACTAC CCGATCCAGG GATCGGCCGC CGACATCATC
AAGGCAGCCA TGCTGAGGGT GATCCGCCGC ATGCAGCAGG AGCGGGTGGC GAGCCGGCTC
ATCATGCAGG TCCACGACGA ACTGGTTTTC GAAGTTCCCG AGGCGGAGCG CGATCTCATG
GAGGAACTGG TGCGGACCGA GATGGAGGGA GCCCTGCCGC TGTCGGTGCC GCTCAAGGTG
GACCTCAATT TCGGGCTTAA CTGGAGCGAG GCGCACTAG
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| Protein sequence | MTTETETLYL LDGSSYIYRA YFAIRHLSSP SGFPTNALYG FTQMLLKVMK DRAPAHVAVI
FDAGKITFRN ELFPAYKATR SAMPEDLAQQ IEPIKQMVRA FNIPALELPG FEADDIIGTI
AKKCEAQGMA CVVVTGDKDL MQIVSDRVTL LDTMKEKSFG IADVYEKFGV APERVVDVLA
LWGDASDNIP GVPGIGEVTA KKLLQEFGSL DELLARAGEV KGKNGERLVE FADQARLCRT
LATIDCNVPI EYSVDDFAVT PPDNRRLAAL FREYGFVTLL KDLTSSPTLS CDRYSLVLTE
EELRRVVAEL EAAPAFAIDL ETTSLNPREA RVVGYAVSCR PHEARYIPVG HRYLGAPEQL
PEALVLEILG PLLKDPARRK IGQNLKYDYQ VLRMAGFEME GIWCDTMLAA YLVNPARNSQ
GLDALALEYL DHRMISYAEV AGSGKCELNF SEVDLDRAGP YSCEDADATY LLHEILLPKV
REQGMEELLF DLEMPLMRIL ADMELHGVKL DVDLMKELSA GFGKQLIELE AQIHEHCGGP
FNINSPKQLG EMLFERMGLA VGKKTKGKTG WSTNVEELER LAEEHEVARL LLQYRSISKL
KSTYTDALPK LVDPATGRVH TSYNQAVTST GRLSSSDPNL QNIPIRGEEG RGIRRAFIAE
PGSLMLSADY SQIELRVLAH LSGDRVLCEA FAAGEDIHRR TASEVFGMFP ELVTSEMRRQ
AKVINFGVIY GQGAFSLAKE LGVTPKQAKA FIDSYFERHS GARSFLDSCI REAEVCGFVT
TIMGRRLCIP EIASKNGNVR AFAQRNAVNY PIQGSAADII KAAMLRVIRR MQQERVASRL
IMQVHDELVF EVPEAERDLM EELVRTEMEG ALPLSVPLKV DLNFGLNWSE AH
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