Gene Gbem_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0320 
Symbol 
ID6783146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp393181 
End bp393639 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content54% 
IMG OID642766289 
Productprotein of unknown function DUF107 
Protein accessionYP_002137147 
Protein GI197116720 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATATTG TGTGGTGGCA CTGGCTCACC TTGGGGCTTA TTCTCATTGG GCTCGAATTA 
ATCATTCCAT CCTTCACCAT CATCTGGTTC GGTCTCGGTG CTGTTATTGT CAGCATCGTC
CTGGCCTCCC TTCCGAGTTG TCCCCTTTCC GTTCAAATTC TCATCTGGAC CGTGGCATCG
GCACTGCTCA CCTTTGCCTG GTTCCGTTTT TTCAATACCC GCCTCGACAG GACCAAGGCC
GGATCGTCAA AGGGAGCCGT GATAGGCGAG ACGGGATTGG TAATTCGTGG CGCCCAGCAA
TACGACAAGG GAACAGTGAA GTTCCATCTG CCGCTGCTGG GAGCGGACGA GTGGCCGTGT
GTGGCGGATG ATCCTTTAGC GGTTGGAGAT CGCGTCCGGG TAGTCGACGT GGAAGGACAT
GTCATGAAGG TCGAAAAAAT AGCAAAAGGG GATAAGTGA
 
Protein sequence
MNIVWWHWLT LGLILIGLEL IIPSFTIIWF GLGAVIVSIV LASLPSCPLS VQILIWTVAS 
ALLTFAWFRF FNTRLDRTKA GSSKGAVIGE TGLVIRGAQQ YDKGTVKFHL PLLGADEWPC
VADDPLAVGD RVRVVDVEGH VMKVEKIAKG DK