Gene Gbem_0305 details

Gene Information

• Locus tag: Gbem_0305
• ID: 6783131
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 378738
• End bp: 379247
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642766274
• Product: OmpA/MotB domain protein
• Protein accession: YP_002137132
• Protein GI: 197116705
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.270512
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAAA AAGTTGCTAT TGCTGCTGTA CTGTCGCTGA TGGTTTCCGG TGTTGCCTAT 
GCAGGGCTTG ACGCTCTCAA GGGCCTGGGA AAAGAAGCAG GGAAGGGCGT TGCTGCCAGT 
GCTAAGGAAG GCGCACTCAG TGCCGTGACC AACAAGCTCA AGAAGGTGCA GAACGAGAAA 
GGCCCGATCA AGTTCAAGAC CGGCAAAGCC GAGATCGATC CTTCCTGCGA CAAGACCATG 
ACCGCCATCG CGGCAATCAT GACCGACTAC CCCGGCTTCC ACGTACAGGT TGACGGCCAC 
ACCGACAACG TCGGCAAGCC CGAGGCAAAC CAGAAGCTTT CCCAGGATCG TGCCGATGCC 
GTAGTGAAAT ACCTGGTGGA CAAGAAAGCC GTCGATGCCA AGCGCCTCTC CGCTAAAGGG 
TTCGGCGACA GCAAGCCCAT CGCCGACAAC AAGACCAAAG CCGGCCAAGC CAAAAACCGC 
CGCGTAGATT TCACCGTCAC CAAGATGTAG 

 

Protein sequence

MFKKVAIAAV LSLMVSGVAY AGLDALKGLG KEAGKGVAAS AKEGALSAVT NKLKKVQNEK 
GPIKFKTGKA EIDPSCDKTM TAIAAIMTDY PGFHVQVDGH TDNVGKPEAN QKLSQDRADA 
VVKYLVDKKA VDAKRLSAKG FGDSKPIADN KTKAGQAKNR RVDFTVTKM