Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0299 |
Symbol | |
ID | 6783125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 365911 |
End bp | 369915 |
Gene Length | 4005 bp |
Protein Length | 1334 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642766268 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_002137126 |
Protein GI | 197116699 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGTG CCAGAAACAA CTTTTCACGT CCCCAGGCCC CGGCTTCGGA ACGTAACAAC GATTCCACCC ATCCCGAAAT TGGGGCTTGG GAGCGCAACA ACACCTTTCC TTGTTCCCAG GTTCCAGCTT CCGAGCACGA GAGCAACTGG AAGCTTCGCT TCCCTGTGCA GCGCAGGCTG GTCCTGATCT CGCTGTTGCT CCCCTTGCTG TTCCTGGGGG TCCCGGGCGC CGCACTGGCC GAGGTGGTGG GAAAACTGAC CGTGGTGGAA GGCGCGGTGG ATATCATGCC GGGCGGCCAG CTTCCGGCGG TAGCGGCCAA GGTTGGGGGG GCGGTGCAGA AAGGTGACTT CGTCCGCACC AAGAGCAATG CCCGGGCCGA GCTCACCTTC AACGACGGGA GCGTCGTCAA GATCGCCCAG AGAAGCCGCA TCGACGTGGG GGAATATTCG GCCTCCAACC GCAAGCTCGC CCTTCCCCGC GGCAAGGTGC AGGCGACGGT CGTTCCCGCG GCGGCCGGCG GCGCGGTGCG CACCTTCGAG ATCCGGACCC CAAATGCCAT AGCCGGTGTG CGCGGCACCT CCTTTTACGT CTATCACCAG GCCAACGTGA CCGGGGTAGC GGTTCTGCAG GGGGTGGTGC ACACCACGAG CCTGTCCCAG CCCTCCAAGG GGGTAACCCT CGTGGCCGGT ACCGCCACCA CCGTCACCAA GCACAACGCC CCCACACCGC CGCGGCCGGT TTCCGACAAG GAGATGAACA GCCACCAAAG CGACGTCAAC CCGACCGGGA ATAAAGGCGG CGAGCCGCAG GGCGCGGCAC CCGCCCCCGC CGGAAACGGC GGTGCGGGTA CTGGCTCATC CAGCTCGCAG GCGACTTCCG GCTCCGGCGG CAGCACTTCT TTAGGTAGCC ATGCGTCAGG ACCTGCGAGT ACTGCCTCTG GTAGTCCCGT TGGCGGTGAT AGTCCTACCC CCAGTACTGG CGGCCCCGGC CTCAGCACCC CTAGTTTTAC GGATCCCAGC CCCGTGCTGA GCGCTCCGCC GACACAAGCC CCCATCTCAC AAGCTCCAAT GACGCCGACC ACGTCACCTA CGACTGTTGT GATCCCAGTG ACAACTGCCA GCACCCAGGC GAGGGACCAG TTCACCCAGG CTGCGACAAG CGGCTCTACT ATCTCGGCTG ATGGAACGGG AACGACCGGC GGAACCACTG GCGGCACAAC CGGCGGCACA CCGCCGGTTT TTAGGGGCAC GCTCGCCGGC GGGCTTATGT CCCGGCTCTC GGTAATAGAT CCTGCCTCCA ACCTGCTCAC CATCGTCAGC GACCCAAGCT TCGCCCCGGT GATCTCGGGC ACGACCTCGC TCTGGGCGAC CAAGAGCGCT TCGATAAGCC TCACCGGCAG CTATCCTACG CTGCCTCTGC AGCAGCCTAA CCACTACTGG TTCGGCCGCT TCTTCTCCGA CAGCACGACC ACCCAAACCA CGACCGACGG CGGCGCCTTC TTCGGCTACT TCGGCGGGAG GTCCATCGAT AACGCCGCAA CCGGCACCAC CATCGACACC AGCCTGAGCG GGATCTACGT CGATCCGACC GGAAAGATCG GCCTGATGCA GGGGGGCGCT GCGGGTGGCA CGGCAACCGG CAAGGTCAGC GGCACCGGTT CGTTGACCCT GACCGAGATG ACCCCGACTA GCACCCTTGT CCCCACGTCT TTCACCGCCG ACTGGTGGAA CTCCAAGACA GGAACGACCA TGGTCGAGCT CACCGGTCCG GTGCTGACGG GCAACATGGG CGGGAAAAAC CAGGCTGAAG GCTTCCTCTT CGATGCCGCC CTCAACTACA GCGGAACTAT TGCCGACCGC GGCGACGTGC TGCAGATCGC CCACCTGGCG GCTGACCCGA CCTTCGGCAT CTGGACCAGG GAATCCTTCG GTTCCTACGC CGGTAGCGGC AGCCAGCTGG TGCTCTCCAG CAACGGGGAG TGGGGCACGG TAGACGCCGC CGGCATCTTC AACCTTGAGA ACGCCGTCAA GGTGGTCTCC CTAGGCAACT GGCAACAAGG GGCCCTCACC GGCAAGGCCG ACGGCGTATG GGGCGACCTG GCTGCCGGGA GCCTCAGGCT ACTCACCGGC AACCTCACGG GGAGCGTGAA CTCAGGCGCC AATGCCACGA CCTTCGGCGC CGTCACCACC GGCGTCTACA TCGACGTGAA CCGCTTCCTG GCCAACCCGA CCCTGGCCGC CGGTCTCGGC TTTCCGACCC TGGCGGGGCC CGACAGCTTC ACCTTGTCCG GGAGCAACGC CACGGGGAGC GTCAGCTTCG GCACCATCAA GTTCTACAAC AGGACGGCCA GCCCCATATC TCTCTGGGTG GCGCAGAACG TGAGCGGCAG CTTCGGCGGG TCGCTGCAGC ACCAGAATTT CTCCCTCATG GACGCCGCCG CTCCTAGCGT CAGCAATGTA ATGGGGAACC TCTGGGTTGC CGGTGTCAGC ACCGCCGGCA ATACCTGGCT TGGGAACGTC AACGCGATCG GTGAGACCGG CACCTCGTTC AGAAGGGGAT TCGACGGCAT AGCCGTAGGC ACCGTCAGCG GCACGACCTT CAGCGGGAGC GCCGCCGGGA TAGCGCACCC GGTCACCTTC TTCAACAAGA TCGTCGGCGA CCTCAAGCGC TTCTCCGCCG GGGCGCTTAC CTCCTACGGC ACAGTAAACG GCGTCATGGG CGGCATGTCC CTGTGGGGCT CCACGCCGCT TCTCACCGCG GACTTCAAGG GGATCGGCTT CCTCACCCCG AGCCAGGCGC TCACCAATAT CGACTACATC TTCACTGCGC CCATCAGCTC CTTTGACGTT CCCACCGGAC AGGCCCTGAC CGCCGACGGC GGCGCCTACT ACGGGCACAT GGTCGGCGGG GTCAGCACCG CGGGGGGGAG TCCCGGCAAC CCCGGCATCA TCGGCGTAGC CAGCGCCCTC TACATCGATC CCTCCGGCAG AGCCGGCGTG CTGCAGGGGA AATTCTCCGG TTTCCTCGAC CCCTCCAGCA AGATCTGGCA AAACGAAGGC GATATGTTCC CGGTACAGCT CGAAGCTGCC CCCACCGTGA CCGCGGCCAC ACTCAACAGC GCCGGCAGCA TCATTACGGC TACGACCAAC TTTGGCGCCG GCACCTCCTT TGTCGGCAAC GGGGTGACGC TAGGCGGGGG GAGCGTCGAC ACCTTTACCC GCAGCTTCCT GGCGAACTCT CCGCAATGGG GCATCGGGCA GTTCGGCTTT TACGCCCCCT ATAGCGCGGG GGCGACCGGC AACACCAACT GGAGCATCGA CTTCGTCCTT CCCGATCCCA ACCTGACCAT GGTGGGGACC ATGGGTGGGC AGATGTGGAA CCCGGGGGCC GGGCAGATGG CTGCAGGGGT TCGGGCCGCA TGGTACGAGA TGGTGAACGT GAGCCCCACC GCGATCCCTA TGACCGGCAT TTTCATCGGG GAGACGGTGG GAACCTTCAA CCCGGTGACG CTGCAGTCCA TGACCTCGGG GATATGGCTT GAGACCAGCA AGTATGTCTC CATGGCGGTC GCCAAAGACC CGGACGGTAT CTTGAACAAG CTGAAAATAC CGGCGGTGGA AGTAGGGAAA GCGGATTTCT CCGGCGGCAA CAGCGAGTAC AGCGTCGCGC TCCAGAACGT GCGCTTCTTC GCGCCGGTTG CCACCGGCCG TCCCCAACTG TTCGCCACCG ACAGCATTTC GGGGAGCTAC GTGAGCGTCC CCACCCCTGG CTCCGCGGCG ACGCTTACCC AGGGCGTGTC TACCAACGCC TCCGGATTCT CCCCCACCTT CACCGTCAAG CAGTGGGATG CGACCAACAG CAAGTGGTCC GGGAGCCTCC AGTTCAACGG CAACAGCGGC ATGGTCGGCA CGCAGCCCAA CGTCCAGTTC ACCGGGGTCG CCGCCGGCCG CAGCGACGCA GGCACGTCCA CCTTCACGGG TACTGCAGCG GGTGTAGTCA AGTAA
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Protein sequence | MISARNNFSR PQAPASERNN DSTHPEIGAW ERNNTFPCSQ VPASEHESNW KLRFPVQRRL VLISLLLPLL FLGVPGAALA EVVGKLTVVE GAVDIMPGGQ LPAVAAKVGG AVQKGDFVRT KSNARAELTF NDGSVVKIAQ RSRIDVGEYS ASNRKLALPR GKVQATVVPA AAGGAVRTFE IRTPNAIAGV RGTSFYVYHQ ANVTGVAVLQ GVVHTTSLSQ PSKGVTLVAG TATTVTKHNA PTPPRPVSDK EMNSHQSDVN PTGNKGGEPQ GAAPAPAGNG GAGTGSSSSQ ATSGSGGSTS LGSHASGPAS TASGSPVGGD SPTPSTGGPG LSTPSFTDPS PVLSAPPTQA PISQAPMTPT TSPTTVVIPV TTASTQARDQ FTQAATSGST ISADGTGTTG GTTGGTTGGT PPVFRGTLAG GLMSRLSVID PASNLLTIVS DPSFAPVISG TTSLWATKSA SISLTGSYPT LPLQQPNHYW FGRFFSDSTT TQTTTDGGAF FGYFGGRSID NAATGTTIDT SLSGIYVDPT GKIGLMQGGA AGGTATGKVS GTGSLTLTEM TPTSTLVPTS FTADWWNSKT GTTMVELTGP VLTGNMGGKN QAEGFLFDAA LNYSGTIADR GDVLQIAHLA ADPTFGIWTR ESFGSYAGSG SQLVLSSNGE WGTVDAAGIF NLENAVKVVS LGNWQQGALT GKADGVWGDL AAGSLRLLTG NLTGSVNSGA NATTFGAVTT GVYIDVNRFL ANPTLAAGLG FPTLAGPDSF TLSGSNATGS VSFGTIKFYN RTASPISLWV AQNVSGSFGG SLQHQNFSLM DAAAPSVSNV MGNLWVAGVS TAGNTWLGNV NAIGETGTSF RRGFDGIAVG TVSGTTFSGS AAGIAHPVTF FNKIVGDLKR FSAGALTSYG TVNGVMGGMS LWGSTPLLTA DFKGIGFLTP SQALTNIDYI FTAPISSFDV PTGQALTADG GAYYGHMVGG VSTAGGSPGN PGIIGVASAL YIDPSGRAGV LQGKFSGFLD PSSKIWQNEG DMFPVQLEAA PTVTAATLNS AGSIITATTN FGAGTSFVGN GVTLGGGSVD TFTRSFLANS PQWGIGQFGF YAPYSAGATG NTNWSIDFVL PDPNLTMVGT MGGQMWNPGA GQMAAGVRAA WYEMVNVSPT AIPMTGIFIG ETVGTFNPVT LQSMTSGIWL ETSKYVSMAV AKDPDGILNK LKIPAVEVGK ADFSGGNSEY SVALQNVRFF APVATGRPQL FATDSISGSY VSVPTPGSAA TLTQGVSTNA SGFSPTFTVK QWDATNSKWS GSLQFNGNSG MVGTQPNVQF TGVAAGRSDA GTSTFTGTAA GVVK
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