| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0209 |
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| Symbol | |
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| ID | 6783031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 244359 |
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| End bp | 247910 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642766175 |
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| Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein |
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| Protein accession | YP_002137036 |
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| Protein GI | 197116609 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
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| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0211552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGCA GAATGGTAAC GATTGACGGC AACACTGCAG CAGCGCACGT GGCCCACGCC
ACCAACGAGG TGATCGCAAT CTACCCGATC ACCCCTTCTT CCGTGATGGG AGAGATCTCC
GACGAGAAAA GCGCCAAGGG CGAGAAGAAC ATCTGGGGAA CGGTTCCCTC CGTGTCCGAA
CTCCAGTCCG AGGGGGGCGC TTCCGGCGCG GTCCACGGCG CACTCCAGGC AGGCGCCTTG
ACCACGACCT TCACCGCCAG CCAGGGCTTG TTGCTGATGA TCCCGAACAT GTTCAAGATC
GCCGGCGAAC TCACCTCCAC CGTGTTCCAC ATCTCCGCCC GCGCCATCTC GGCGGCCGCG
CTCAACATCT TCGGCGACCA CTCCGACGTC ATGGCCGCCC GCGCAACCGG CTGGGGGATG
CTCTGCTCCA ACAACGTGCA GGAGGTCATG GACTTCGCGC TGATCTCCCA GGCTGCCACG
CTGCGCGCCC GCGTCCCGTT CATGCACTAC TTCGACGGCT TCAGGACCTC GCACGAGGTG
CAGAAGGTCG AGGAACTGAC CTTCGACGAC ATGCGCGCCA TGATCAATGA CGACCTGGTG
CAGGCGCACC GCCTGCGCGC CCTCACCCCG GATCGCCCCG TGATGCGCGG CACCGCGCAG
AACCCCGACG TCTACTTCCA GGGTCGCGAG ACCGTCAACG CCTACTACCC CGCAGCCCTC
AAGATCGTGC AGGAGGAGAT GGAGAAGTTC GCCGGGATCA CCGGCCGCAA GTACTCGGTC
GCCGAATACG TCGGCGCCCC CGACGCCGAC CGCGTCGTCA TCGTCATGGG TAGCGCCGCC
GACACCGTCC AGGAGACCAT CGAGACCCTG GCGGCCAAGG GTGAGAAGAT AGGCCTGGTC
AAAATCCGCC TGTTCAGGCC CTTCCCGGTA GACGCCTTGG CAGCCTGCCT GCCTGCCTCC
GTCAAGAAGA TCGCCGTCCT CGACCGCACC AAGGAGCCGG GTTCCCTCGG CGAGCCGCTC
TACCTGGACG TGAGAACCGC CATCGGCGAG GCCATGGCCG ATGGGAAGAC CTCCTTCAAG
AACTACCCGA TCATCGTCGG CGGCCGCTTC GGCCTGGGCT CCAAGGAGTT CACCCCGGGC
ATGGCCAAAG GGGTCTTCGA CAACCTGAAA GCGGACAAGC CGAAGAACCA CTTCGTCGTC
GGCATCAAAG AGGACGTCAC CAACTCCTCG CTCGACTTCG ACAAGAGCTT CGTGAACCCC
TCCGCCGGGA CCTATGCGGC GATGTTCTAC GGCCTGGGCT CCGACGGCAC CGTCGGCGCC
AACAAGAACT CCATCAAGAT CATCGGCGAG AAGACCGACA ACAACGTCCA GGCCTACTTC
GTCTACGACT CCAAGAAGGC TGGATCCGTC ACCACCTCGC ATCTTCGTTT CGGCAAGGGG
GCCATCCGCT CGCCGTACCT GATCGACCAG GCCGACTTCA TCGCCTGCCA CAACTTCTCC
TTCCTCGAGA AGTACGACAT GCTGACCAAC GCCAAGCAGG GCGGCACCTT CCTCCTTTGC
TCTCCGTTCG ACAAGGAGCA GGTCTGGGAC TCCATGCCGG TCGAAGTTCA GCAGCAGATC
ATCGACAAGA AGCTCAAGTT CTACGTGATC AACGCCATCG CGCTCGGCGA GAAACTCGGT
CTGGGCGCCA GGATCAACGT GATCATGCAG ACCGCCTTCT TCAAGATCTC CAATATCATG
CCGCTTGACA CCGCGCTCGC AGCCATCAAG GACGCCATCA AGAAGAGCTA CGGCAAGTCC
GGCGACAAGG TCGTCGACAT GAACAACAAG GCGGTCGACG CGGCCCTCGA GAACATCTTC
GAGGTAGCAG TCCCGGCCAA GGCGAGCAGC GCCCTCAGGA AGCCCCCGGT CGTCGGCGCC
CATGCACCGA AGTTCGTCCA GGAAGTCACC GCGCAGCTCA TCGCCGGCTA CGGCGACGAG
GTTCCGGTCT CCATGATACC GGCCGACGGC ACCTTCCCGA CCGGCACCTC CCAGTACGAG
AAGCGCAACA TCGCGGTCGA CATCCCGGTA TGGGACGAGC AGCTCTGCAT CCAGTGCGGC
ATCTGCTCCT TCGTCTGCCC GCACGCCTCC ATCAGGATGA AGGTCTACGA CGCCGACAAG
CTCTCCGGCG CCCCGGCAAC CTTCAAGTCG GCCGACGCGC GCGGCAACGA GTTCAAAGGG
ATGAAGTGCA CCGTGCAGGT AGCTCCCGAA GACTGCACCG GCTGCGCGGC CTGCGTGGCC
AACTGCCCCG CGAAGTCCAA GGAAGACGCC AACAAGAAGG CGATCAACAT GCAGTTCCAG
GCGCCGCTTC GGACCTCGGA AGCCGCCAAC TACGACTTCT TCCTGGCGAT GCCCGAGACC
GATCCCAAAC TGGTGAAGCT GGAGACCCTG AAAGGGAGCC AGCTGGCACG GCCGCTCTTC
GAGTACTCCG GCGCCTGCGC GGGTTGCGGC GAGACCCCTT ACCTGAAGCT CATGTCGCAG
CTCTTCGGCG ACCGCGCCAT GATCGCCAAC GCCACCGGCT GCACCTCCAT CTACGGCGGC
AACCTCCCCA CCACCCCGTG GGCGAAGAAC GCCGACGGCC GCGGCCCGGC CTGGTCCAAC
TCCCTCTTCG AGGACAACGC CGAGTTCGGC TTCGGCATGA GGCTTGCCGT CGACAAGTTC
AACCAGGCCG CAACCGAGCT CCTGGACGTG GTCTCGCTCC CGGCAGAACT GGTAGCCGAG
ATCAAGGGGG CCGACCAGCA GACCCAGGCC GGCGTCGAGG CGCAGCGCGC ACGCGTCGCC
AAGCTGAAGG ATCTCCTGGC AGGCTCCAAG GACGCAGCAG CCAAGAAGCT CCTCTCCATC
GCCGACTACC TGGTGAAGAA GTCGGTCTGG ATCGTGGGGG GCGACGGCTG GGCCTATGAC
ATCGGCTACG GCGGCCTGGA CCACGTCATC GCCTCCGGCA AGAACGTGAA CCTCCTGGTC
CTCGACACCG AGGTCTACTC CAACACCGGC GGCCAGGCCT CCAAGTCCAC CCCGATGGGC
GCCGTGGCGC AGTTCGCTGC GGGCGGGAAG CCGCAGGCGA AGAAGGACCT CGCCATGATC
GCCATGGCCT ACGGCAACGT CTACGTCGCC AAGGTCTCCC TCTCCAACCC GGCCCAGGTG
GTCAAGGCGT TCATCGAGGC GGAAGCCTAC AACGGACCGT CCCTCATCCT TGCCTACAGC
CACTGCATCG CCCACGGCAT CGACATGGCA ACCGCGGTCG AGACCCAGAA GCGTGCGGTA
GCCTCCGGCC ACTGGCCGCT GGTCCGCTAC AACCCGGACC TCGCCGAGCA GGGCAAGAAC
CCGCTCCAGC TCGACAGCAA GGCTCCGAGC ATCTCCCTCG AAGAGTACGC CTACGGCGAG
AACCGCTACC GCGTGCTGAA AAAGAGCAAC CCTGAGGCTG CTGCCACCCT CATGGCACGC
TCCTCCGAGC TCACCGCCCG CCGCTTCGAT CTCTACAAGC GGATGGCGGA AATGGATTTC
GAGAACAAAT AA
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| Protein sequence | MSRRMVTIDG NTAAAHVAHA TNEVIAIYPI TPSSVMGEIS DEKSAKGEKN IWGTVPSVSE
LQSEGGASGA VHGALQAGAL TTTFTASQGL LLMIPNMFKI AGELTSTVFH ISARAISAAA
LNIFGDHSDV MAARATGWGM LCSNNVQEVM DFALISQAAT LRARVPFMHY FDGFRTSHEV
QKVEELTFDD MRAMINDDLV QAHRLRALTP DRPVMRGTAQ NPDVYFQGRE TVNAYYPAAL
KIVQEEMEKF AGITGRKYSV AEYVGAPDAD RVVIVMGSAA DTVQETIETL AAKGEKIGLV
KIRLFRPFPV DALAACLPAS VKKIAVLDRT KEPGSLGEPL YLDVRTAIGE AMADGKTSFK
NYPIIVGGRF GLGSKEFTPG MAKGVFDNLK ADKPKNHFVV GIKEDVTNSS LDFDKSFVNP
SAGTYAAMFY GLGSDGTVGA NKNSIKIIGE KTDNNVQAYF VYDSKKAGSV TTSHLRFGKG
AIRSPYLIDQ ADFIACHNFS FLEKYDMLTN AKQGGTFLLC SPFDKEQVWD SMPVEVQQQI
IDKKLKFYVI NAIALGEKLG LGARINVIMQ TAFFKISNIM PLDTALAAIK DAIKKSYGKS
GDKVVDMNNK AVDAALENIF EVAVPAKASS ALRKPPVVGA HAPKFVQEVT AQLIAGYGDE
VPVSMIPADG TFPTGTSQYE KRNIAVDIPV WDEQLCIQCG ICSFVCPHAS IRMKVYDADK
LSGAPATFKS ADARGNEFKG MKCTVQVAPE DCTGCAACVA NCPAKSKEDA NKKAINMQFQ
APLRTSEAAN YDFFLAMPET DPKLVKLETL KGSQLARPLF EYSGACAGCG ETPYLKLMSQ
LFGDRAMIAN ATGCTSIYGG NLPTTPWAKN ADGRGPAWSN SLFEDNAEFG FGMRLAVDKF
NQAATELLDV VSLPAELVAE IKGADQQTQA GVEAQRARVA KLKDLLAGSK DAAAKKLLSI
ADYLVKKSVW IVGGDGWAYD IGYGGLDHVI ASGKNVNLLV LDTEVYSNTG GQASKSTPMG
AVAQFAAGGK PQAKKDLAMI AMAYGNVYVA KVSLSNPAQV VKAFIEAEAY NGPSLILAYS
HCIAHGIDMA TAVETQKRAV ASGHWPLVRY NPDLAEQGKN PLQLDSKAPS ISLEEYAYGE
NRYRVLKKSN PEAAATLMAR SSELTARRFD LYKRMAEMDF ENK
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