| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0189 |
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| Symbol | |
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| ID | 6783011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 221150 |
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| End bp | 223633 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642766155 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_002137016 |
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| Protein GI | 197116589 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCT ATAAGGCGCA GCCCCGGCAG CAAAACCGCA GACTGAAGCA GCGGACGGGA
GGCAAAGTCC TCCTCGCCGC CTTCGCGACC GTTTCAACCA TCCTGTTTCT CGCCTTCATC
GGCTATTTCT TCTACCTTCT GGGAGCACTC CCAAAGGTGG ACCGCCTGGC GGACTACCGC
CCGCCCATCC TTTCCCAGGT CTACGGCGCC GACGGCGCCC TGGTGGGGGA ATTCTACCTG
GAGCGGCGCA CGGTGGTCCC GGTAGACAAG ATGCCCAAAC GGCTGATCCA GGCCTTCGTC
TCCGCCGAGG ACTCGAACTT CTACCAGCAC AAGGGTATCG ACTACGTCGG CATCGCCAGG
GCCGCTTTCA AGAACCTGAT ATCCATGCGC AAGAAGGAGG GGGCCTCCAC CATCACGCAG
CAGGTCGCCA AGTCGATGCT GCTCACCCCG GAAAAGAAGT TCTCCCGCAA GCTCAAGGAG
GCGATCCTCG CTAAAAGGAT GGAGGAGCGG CTCTCCAAGG ACGAGATCCT CTACATCTAC
CTGAACCAGA TCTACCTCGG GGCGGGGGCC TACGGCGTGC AGCTTGCGGC CGAGACCTAC
TTCGGCAAGG AAGTCGAGAA CCTGAACCTC GCGGAGATGG CGATGCTGGC CGGGCTCCCC
AAGGCCCCCA ACAGCTACTC CCCCATCAAG CACCTGGACC GGGCCAAGGA GCGCCAGGCG
TACGTGCTGG AGCGGATGGT GAAGGAGGGG TACATCACTC AGGCCGAGGC GCAGTACGCC
AAGGCGACCC CTATCGTGAT CCAGCCGCTC AAGAAGGTGA ACGCGGAGCA GTCGGCCTAC
TTCCTTGAGC AGGTGCGGCA GCAGCTGGTG CAAAAGTACG GCGAGGAGCG GCTCTACAAG
GACGGCCTCA AGATCTACAC CACCATGAAC GGAGAGATGC AGAAGGCGGC CTACACCTCG
GTCGTGAACG GCCTGAAGGC GGTGGACAAG CGCCAGGGGT TCCGGGGGGC CGCGAAGTAC
CTCCAGGAAG CAGAGGTGGA GCCTTTCTGC AAGAAGGTCG AGGACGAGAT CGACGACCTC
TCCCTGAAGG AGGGGAACGT CTATCAGGGG GTGGTGACCG GCGTCGACCC GGCGAAACGC
GAGCTCACCG TGCAGGTGGG GGAGCGTACC GGGACCGTCC CCAGGAAGAA CATGGAATGG
GCCGGGAAGC TGGAGCTGAT CCCCAGGTTC GGAAAACCTG AGGCGAAGCG CGCCATCGGG
CTTGGCGCCG TTTTGGAGCT GCAGGTGAAG GTGCCGGATC AGAACAGGAC CGGGGCGGTG
TTCGCGCTGG ACCAGGCCCC TGAGGCACAG GCGGCGCTGA TAGCCCTTGA CCCGTTGACC
GGGGGGGTGC GCGCCATGGT CGGGGGGTAC GACTTCAAAA AGAGCCAGTT CAACCGCGCC
ATGCAGGCCA AGCGGAATCC GGGCTCCGCG TTCAAGCCAG TCATCTACGC CGCCGCTTTG
GACAACGGCA TGACAACCGC AAGCGTCATC GACGACTCCC AGGTTGAATA CGAAAGCGGT
GCGGAGAAGG CCTGGAAACC CAAGAACTAC GACAACGTCT ACCGCGGACC GGTCACCATG
CGCGAGGCGC TTACCGAGTC GATCAACGTG GTGAGCGTGA AGATCCTGGA ACAGATCGGG
GTGGGAACCG CCATCGAGTA CGCCAAGAAG ATCGGGATCA CCTCCCCCTT GGCCAGCAAC
CTGACCCTCG CCCTCGGTTC CTCTTCGGTG ACCCCTATCG AGCTCACCAG CGCCTATGCC
GTGTTCGCTT CCGGCGGTTA CCGGACCACC CCCTACTTCG TCACCAAGGT GCTCGACCGC
GATGGGAACG TGCTCGAGGA GACGGCGGAG CCGAAGATCC CCGTTTTCAG CCGCATGTCG
TCTGCCGGCG AAGGGGACGA GAACACGGCG CCAGGCGAGA ATGGGGAAGG AGCGGCACCG
AAGCCGGCCG AAGCCGGCTT GAACTCGGCC GCAGGGGGGG CCTTCCCGGT GATCCCGCCT
GAGACCGCCT TCATCATGAC CAACCTGATG CAGAGCGTCG TCACCAGCGG CACCGGCGGC
AGGGCACGCG CCGTGGGGAG GCCGGTCGCC GGCAAGACCG GGACCACCAA CGACATGAAG
GATGCCTGGT TCGTGGGATA CGTGCCGCAA CTGGTGGCCG GGGTGTGGGT AGGATACGAC
CAGGAGCGGA GTCTGGGAGC CGGAGGATCT GGGGGCCAGG CGGCAGCGCC GATCTGGACC
GACTTCATGC AACGCGCCCT CGCCGGCCTT CCGGTGAAGT CGTTCCCCAC CCCGGGGAAC
GTCACCTTCG CCCTCATCGA CCCCCGCACG GGGCACCTGG CGCGCGAAGG GACCCCCGGC
GCGGTGCAGG AATGTTTCAT CGCCGGGACG GAACCGACCA GCTACGGCGC CGAGCCGCAG
GCGGATGCAG GTGGCGCGCC GTAA
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| Protein sequence | METYKAQPRQ QNRRLKQRTG GKVLLAAFAT VSTILFLAFI GYFFYLLGAL PKVDRLADYR
PPILSQVYGA DGALVGEFYL ERRTVVPVDK MPKRLIQAFV SAEDSNFYQH KGIDYVGIAR
AAFKNLISMR KKEGASTITQ QVAKSMLLTP EKKFSRKLKE AILAKRMEER LSKDEILYIY
LNQIYLGAGA YGVQLAAETY FGKEVENLNL AEMAMLAGLP KAPNSYSPIK HLDRAKERQA
YVLERMVKEG YITQAEAQYA KATPIVIQPL KKVNAEQSAY FLEQVRQQLV QKYGEERLYK
DGLKIYTTMN GEMQKAAYTS VVNGLKAVDK RQGFRGAAKY LQEAEVEPFC KKVEDEIDDL
SLKEGNVYQG VVTGVDPAKR ELTVQVGERT GTVPRKNMEW AGKLELIPRF GKPEAKRAIG
LGAVLELQVK VPDQNRTGAV FALDQAPEAQ AALIALDPLT GGVRAMVGGY DFKKSQFNRA
MQAKRNPGSA FKPVIYAAAL DNGMTTASVI DDSQVEYESG AEKAWKPKNY DNVYRGPVTM
REALTESINV VSVKILEQIG VGTAIEYAKK IGITSPLASN LTLALGSSSV TPIELTSAYA
VFASGGYRTT PYFVTKVLDR DGNVLEETAE PKIPVFSRMS SAGEGDENTA PGENGEGAAP
KPAEAGLNSA AGGAFPVIPP ETAFIMTNLM QSVVTSGTGG RARAVGRPVA GKTGTTNDMK
DAWFVGYVPQ LVAGVWVGYD QERSLGAGGS GGQAAAPIWT DFMQRALAGL PVKSFPTPGN
VTFALIDPRT GHLAREGTPG AVQECFIAGT EPTSYGAEPQ ADAGGAP
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