Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0178 |
Symbol | |
ID | 6783000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 207747 |
End bp | 210131 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642766144 |
Product | trifunctional NADH dehydrogenase I subunit B/C/D |
Protein accession | YP_002137005 |
Protein GI | 197116578 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCCAGG GTGACGACGA CAAAATACCC GAAAACGTAC TGCTCGCCTC CCTGGACGAC ATGATCAACT GGGGGAGGGC GAATTCTCTA TGGCCGATGT TCTTCGGCCT TTCCTGCTGC TTCGTCGAAA TGATGACCTC GTTTACCTCC CGCTACGACG TCTCGCGCTT CGGGGCGGAG GTGCTCCGCG GCACCCCCCG CGAATCCGAC CTCATGGTGA TAGCCGGCAC CGTCTTCAAG AAGATGGCCC CCAGCATCCT CAGGCTCTAC GACCAGATGG CCGAGCCCAA GTGGGTTATC TCCATGGGGA GCTGCGCCAA CTCTGGCGGG ATGTACGACG TCTACAGCGT GGTCCAGGGG GTGAACCAGA TACTCCCGGT CGATCTCTAC ATCCCGGGTT GCCCGCCGCG GCCGGAGTCG TTCCTGGAAG GGCTGATGCT GCTGCAGCAA AAGATCCGCA GCGAAGAGCG CCCGACCCGC CCGGTGCTGA GGATGCAGGG GGGGACCCAG GGGACGGTGG CTCCCATCCT GGTGGACGGC GCCACCAAGT CGCGCGACAC CCGGGGCCCC GGGATGGAGG GGATCGCCAT ACGCGGGAGC GCCATGCAGC CCCCCTACTT CGCGGCCCCG CGCTCCGACG AGCTCTGGCG CCCGAAACAG CCCCGGCTCC CCTACCCCGA CTTCAATCTG CAGGCGGAAC TGCAGGGGGC GTTCGCAGGC CAGGTGGTCC TGGACGAAAC CGCCTGCGAC ATGCTGACCT ACCGCGCGCC GGCGCGCCTG GTGCCGGAAC TGCTCCGGCA CCTCAAAGAG CGCAAGGAGT CCCCCTTCAG GCGCCTGGAG GACATCGCCT GCGTGGACGA GTCCTGCCGT CGCGACCGGG AAAAGTACAA GGATTTCACC GTCAATTACC ACCTCACCTG CTTCGACACC CCGGGGAGGA TCAGGATCAA GACCGAGCTT GAGGGGAGTT ATCCCGAGGC CCCCAGCATC ACCTCCGTCT TCCCGGTCGC CAACTGGTAC GAGCGGGAAG CCTACGACAT GTTCGGCATC CGCTTCGCCG GCCATCCCAA CCTGAGAAGG ATACTGATGC CCCCGGATTG GGACGGGCAT CCGCTCCGCA AAGAGCACCC GGCCCGGGCC ACGGAGCTTC CCCCCTACAC GGCGGAAGAC GCGCGCAGGC AAAAAGCGCT CCCAGCTGGC GACTTCTTCG ACCGGGTGGA CGACGAGACC CTGATCCTGA ATTTGGGCCC GCAGCACCCC GGCACCCACG GCGTTATCAG GTTCGTGCTC AAGCTCTCCG GCGAAGAGAT CGTCGACATG GACAGCGACA TAGGCTACCA CCACCGGGCC GCGGAGAAGA CCGGCGAGCG GCAGAACTGG CACCAGTACA TCCCCTACAC GGACCGGGTG GACTACCTCT CGGGGGTGCA GAACAACCTG GCCTACCTGA ACTCTGTGGA GACCCTCTGC GGCATCGAGA TACCGGACCG GGCCATCTAC ATCCGGGTCA TGCTCTGCGA GCTGTTCCGG ATCGCGAACC ACCTGGTCTG GCTCGGCACC TTCGCCTCCG ACCTGGGCGC CATGACTCCG GTCTTCTACA CCTTCACCGA CCGGGAGAAG ATCTTCGACA TCGTCGAGTT CATCACCGGC GGCCGGATGC ACCCCGCCTG GTTCCGGATC GGCGGCGTCG CCGAGGACCT ACCCGAGGGG TGGCAGGAGA AGGTGCATTC CTTCCTGGAA TGGTTCCCGG GAAGGCTCGC CGAGTACGAA AAGCTCCTCT CGGGGAACCC CATCTTCGTG GCGCGGCTGA AAGGTGTCTC CGCCATCACC GTAGACACGG CTCTTGAGTG GGGGATCACC GGACCCAACC TGCGCGCCTG CGACTTCGCC TGGGACCTCC GGAAGAAAAT GCCCTACGGC GGCTACGACC GCTTCGAATT CGAGGTGGCG ACGGCGCAAG GGGGCGACTG CTACGCACGC TACCAAGTGC GGATGGAGGA GATGAGGCAG TCGCTCTCCA TCGTGAGGCA GGCCGCGGCC GGGATGCCGG GGGGGCGTTT CATCTCCCCT GACTACCGCT ACACTCTGCC GCAGAAACGG GACGCCCTCG AAGATATCGA GTCGCTGATC CACCACTTCG TCAACTCCAC CCGCGGCATC TCCCCCCCGA AAGGGGAGTG CTACGCACCC ATCGAGGGGT CGAAGGGTGA GTACGGCTAT TTCGCCGTGT CGGACGGGCT GCATACCGCC TACCGCATGA GGATACGGAC CGCCACCTTT CCGCACATCC AGTCGCTTCC GGTGTTAAGC CGCGGCTGGC TGGTGTCCGA TTTCCTGGCC ATTCTTGGGT CGTTGGATTT CGTGCTTTCG GATTTGGACC GGTAA
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Protein sequence | MSQGDDDKIP ENVLLASLDD MINWGRANSL WPMFFGLSCC FVEMMTSFTS RYDVSRFGAE VLRGTPRESD LMVIAGTVFK KMAPSILRLY DQMAEPKWVI SMGSCANSGG MYDVYSVVQG VNQILPVDLY IPGCPPRPES FLEGLMLLQQ KIRSEERPTR PVLRMQGGTQ GTVAPILVDG ATKSRDTRGP GMEGIAIRGS AMQPPYFAAP RSDELWRPKQ PRLPYPDFNL QAELQGAFAG QVVLDETACD MLTYRAPARL VPELLRHLKE RKESPFRRLE DIACVDESCR RDREKYKDFT VNYHLTCFDT PGRIRIKTEL EGSYPEAPSI TSVFPVANWY EREAYDMFGI RFAGHPNLRR ILMPPDWDGH PLRKEHPARA TELPPYTAED ARRQKALPAG DFFDRVDDET LILNLGPQHP GTHGVIRFVL KLSGEEIVDM DSDIGYHHRA AEKTGERQNW HQYIPYTDRV DYLSGVQNNL AYLNSVETLC GIEIPDRAIY IRVMLCELFR IANHLVWLGT FASDLGAMTP VFYTFTDREK IFDIVEFITG GRMHPAWFRI GGVAEDLPEG WQEKVHSFLE WFPGRLAEYE KLLSGNPIFV ARLKGVSAIT VDTALEWGIT GPNLRACDFA WDLRKKMPYG GYDRFEFEVA TAQGGDCYAR YQVRMEEMRQ SLSIVRQAAA GMPGGRFISP DYRYTLPQKR DALEDIESLI HHFVNSTRGI SPPKGECYAP IEGSKGEYGY FAVSDGLHTA YRMRIRTATF PHIQSLPVLS RGWLVSDFLA ILGSLDFVLS DLDR
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