| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0150 |
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| Symbol | |
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| ID | 6782972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 180127 |
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| End bp | 182115 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642766116 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_002136977 |
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| Protein GI | 197116550 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00713104 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAT TCGAACTGGT AACAAGTTTC GAGCCCCGCG GCGACCAACC CAGGGCCATC
GCAGAACTGG CGGACGGAGT GCTGCGGGGC GATCCGCACC AGGTGCTCCT CGGGGTCACC
GGGTCGGGCA AGACCTTCAC CATGGCCCAG GTGATCGCAC GCTGCAACTG CCCCACCCTG
GTCCTTGCGC CCAACAAGAC GCTGGCCGCC CAGCTCTACG GCGAGTTCAA GGAACTGTTC
CCCAACAACG CCGTCGAGTA TTTCGTTTCC TACTACGACT ATTACCAGCC TGAAGCCTAC
ATCCCCTCCT CCGATACCTT CATCGAGAAG GACTCCTCGA TAAACGACGA GATCGACAAG
TTCAGGCACT CCGCCACCAG GAGCCTTTTG ACCCGCCGCG ACGTCATCAT CGTCGCCTCG
GTTTCCTGCA TTTACGGCAT AGGCTCCCCC GAGTCGTACC AGGAGATGCA GATCCGCTTC
CGGGAAGGGG ACGAGGTAGG GCGCGACGAA ATGCTGCAGC GTCTGGTGGC GATCCAGTAT
CAGAGAAACG ACGTCGATTT CCACCGCGGC TCCTTCCGGG TCCGTGGGGA CACGGTCGAG
GTCTTCCCCG CCCACGACGA CGAGCGGGCG CTCAGGATCG AGTTCTTCGG GGACACGGTG
GATGCCATCT CCGAGATAGA CCCTTTGCGC GGGGTGCAGC TGCAGAAGCT TTCCCGCTGC
GCCATCTACC CTGCCTCCCA TTACGTCGCC AGCCGCCAGA CCCTGGAGCG GGCCGTGGAG
CAGATCCGAC TCGAACTGGA GGAACGGCTC CGCTACTTCA ACTCGCAGAA CATGCTGCTT
GAGGCGCAGC GCATTGAGCA GAGGACCTTT TTCGACATCG AGATGATGGA GGAGATGGGT
TTTTGCCAGG GGATCGAAAA CTACTCGCGC CACTTCGACG GCCGCGCCGC CGGCGAGCCC
CCTTATACGC TGATCGACTA TTTCCCCAAG GACTTCCTGC TGGTGATCGA CGAGTCCCAC
ATCACCGTTT CGCAGGTGGG GGGGATGTAC CGCGGCGACC GCAGCCGGAA AGAGACCCTG
GTGAACTACG GTTTCAGGCT CCCCTCCGCC CTGGACAACC GCCCGCTCAC CTTCCAGGAG
TTCCAGAAGA AGCTGCACCA GACCATCTAC GTTTCCGCGA CACCGGCGGA CTACGAGCTG
AAGCTGGCGG AAGGGGTCGT GGTCGAGCAG CTGATCCGCC CCACCGGTCT TATCGACCCG
GCCATCGAGG TGCGCCCGGC CGCCGGGCAG GTGGACGACC TGCTGCACGA GGCGCGCGAG
ACGGCGGCCA GGGGAGAACG GGTGCTGGTC ACGACCCTTA CCAAGCGCAT GGCCGAGGAG
CTCACCGACT ACTACCGCGA GCTTGGGATC CGCGTCCGTT ACCTCCACTC CGACATCGAC
ACCTTCCAGC GCATGGAGAT CCTCAGGGAC TTAAGGCTCG GCGAGTTCGA CCTGCTGGTC
GGGATCAACC TGCTCAGGGA AGGGCTCGAC CTCCCCGAGG TCTCGCTGGT GGCGATCCTC
GATGCGGACA AGGAAGGGTT CCTCCGCTCC ACGAGGTCGC TGATCCAGAC CTGCGGCCGC
GCGGCGAGGA ACGTGTCGGG GCGTGTCCTC ATGTATGCGG ACAAGGTGAC CGGTTCCATG
CAGGCCGCCA TCGACGAAAC CCTCAGGAGG CGCGCTTTGC AGACGGCCTA CAACGAGGAG
CACGGCATCA CACCGGAGAG CGTGCGGAGG ATGATCGGGA ACGTGCTTCA GGCGCCTGAG
GAGAAGGACT GGGTCACGGT GCCGGCATCG GCCGAGGAGT TCTTGAGCGT CAAGGAGCTG
GAGAAGACGC TGAAGAGGCT GCGAAAGGAG ATGCTGGCGG CGGCCAAGGC TCAGGAATTC
GAAAGGGCCG CGGAGCTGAG GGACAAGATC AAGCGGCTGG AGGTTGCGGA AATCACCAGG
GGAAGCTGA
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| Protein sequence | MDKFELVTSF EPRGDQPRAI AELADGVLRG DPHQVLLGVT GSGKTFTMAQ VIARCNCPTL
VLAPNKTLAA QLYGEFKELF PNNAVEYFVS YYDYYQPEAY IPSSDTFIEK DSSINDEIDK
FRHSATRSLL TRRDVIIVAS VSCIYGIGSP ESYQEMQIRF REGDEVGRDE MLQRLVAIQY
QRNDVDFHRG SFRVRGDTVE VFPAHDDERA LRIEFFGDTV DAISEIDPLR GVQLQKLSRC
AIYPASHYVA SRQTLERAVE QIRLELEERL RYFNSQNMLL EAQRIEQRTF FDIEMMEEMG
FCQGIENYSR HFDGRAAGEP PYTLIDYFPK DFLLVIDESH ITVSQVGGMY RGDRSRKETL
VNYGFRLPSA LDNRPLTFQE FQKKLHQTIY VSATPADYEL KLAEGVVVEQ LIRPTGLIDP
AIEVRPAAGQ VDDLLHEARE TAARGERVLV TTLTKRMAEE LTDYYRELGI RVRYLHSDID
TFQRMEILRD LRLGEFDLLV GINLLREGLD LPEVSLVAIL DADKEGFLRS TRSLIQTCGR
AARNVSGRVL MYADKVTGSM QAAIDETLRR RALQTAYNEE HGITPESVRR MIGNVLQAPE
EKDWVTVPAS AEEFLSVKEL EKTLKRLRKE MLAAAKAQEF ERAAELRDKI KRLEVAEITR
GS
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