| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0098 |
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| Symbol | |
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| ID | 6782916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 122824 |
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| End bp | 123849 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642766060 |
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| Product | dihydrouridine synthase DuS |
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| Protein accession | YP_002136925 |
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| Protein GI | 197116498 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00993648 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGG AAAACCCGCG CCACCAAGCC CTCCAGCCGA ATTCCGCAAC ACCTGCGCCA
GCACCCTCGA AGCTCCCCTG GCTTCCCGGG GTGAAGCCGC TCATGCTGGC CCCCATGCAG
GGGTTGACCA ACCGTGCGCT CCGCTCGCTT TTCACCAAGT GGGTGCGTCC GGACGTGGTC
TGGACCGAGT TCATGCGGGT GAACCCGGTG TCGGCCAAGA AGCGCCTCAT GCCGGGCGAC
CTGCGCGAGA TCAGTGCCAG CGAGGACGGG ATTCCCCTAG TGGTGCAGTT GATCGGGCAC
GGGCGGGAGG CGCTCGTTTC CGCGGCGCAA GCCGCGCAGG ACGCGGGGGC GGTGCACCTG
AACCTGAACA TGGGATGCCC CTACGGCCGC ATGACCAGCG GGCTTACCGG CGGCGGTATG
CTGAAAAAGC CGGAACTTCT GGAAGAGATC ATCCCTGCGC TGCGCGAGGC GATCCACGGC
TCCTTCTCCA TCAAGCTCCG CGCGGGGTAC GAAGACCCGC AGCAGGTGTT CTCGCTTCTC
CCTCTCTTCG AGCGGTCCGG TGTGGACTTC CTGGTGCTCC ATCCGCGCAC CGTGCGCCAG
GCCTACAACG GCTGGGCCGA TCACGAGGTG ACGGCGGAGG TGGTGCGCCA AACCTCCATC
CCGGTCATCG CCAACGGAGA CATCAGGAGC GCGGCGGGTG GGCAGCGCCT TTTGGAGCAG
ACCGGCGCCG CCGGCCTCAT GCTCGGCAGG GGGGGCATCG GCGAGCCCAT GCTCTTCGAG
CGTTTGCGCG GGCGCGCTGC AGCCGAACCG GACCTCGCCG AAAGAAAAGC CATGCTCCAC
CGCTACCTAA TCGACCTGCT TCCCCTTTAC TGCGCCCTTT TCTGCGGCGA CGCCCAGGTC
CTGGGGAAGA TCAAAGGCGT GGTCTCCAAT GTCGAAGACG CAGAACTTGA GCGCGAACTG
AAAAAGCTTA CAAGATCCAA GACCCTGCAG GCCTTCCGGT CGGCGCTAGA AGAACTCGCC
CCTTAG
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| Protein sequence | MTMENPRHQA LQPNSATPAP APSKLPWLPG VKPLMLAPMQ GLTNRALRSL FTKWVRPDVV
WTEFMRVNPV SAKKRLMPGD LREISASEDG IPLVVQLIGH GREALVSAAQ AAQDAGAVHL
NLNMGCPYGR MTSGLTGGGM LKKPELLEEI IPALREAIHG SFSIKLRAGY EDPQQVFSLL
PLFERSGVDF LVLHPRTVRQ AYNGWADHEV TAEVVRQTSI PVIANGDIRS AAGGQRLLEQ
TGAAGLMLGR GGIGEPMLFE RLRGRAAAEP DLAERKAMLH RYLIDLLPLY CALFCGDAQV
LGKIKGVVSN VEDAELEREL KKLTRSKTLQ AFRSALEELA P
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