| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0083 |
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| Symbol | |
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| ID | 6782901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 101019 |
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| End bp | 102677 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642766045 |
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| Product | General secretory system II protein E domain protein |
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| Protein accession | YP_002136910 |
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| Protein GI | 197116483 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGGC TTGTCAAAGA AGGATCCATC GGCGAGATCC TTTTCAAATC GCAGATCATC
ACGGAGCAGG AACTGAGCGC GGCGCTCGAA GAGCAGAAGG TCTCGGGGTG CCGGGTGGGC
GAGGCGCTGG TCCGTCTGGG GGTGGTTGCC CAGGAGGATA TCGACTGGGC GCTCGCCAAC
CAGCTGAACA TCCCCTATGT GCGGCTCAAG AAGGAAAACA TCGATCCCGC CGCGGTGGCG
AAGGTCCCGG GACAACTGGC CCGGCGCTAC AGCCTCTGCC CCATCTTCCT TTCCGGCAGC
GAACTCTCCA TCGCCATGGC GGACCCCCTG AACAAGGAGG CGGTCGAAGA GATCACCCGG
GTGACCGGCT GCCAGATCAG CATCTCGGTG GGGCTCATCC GCGAGATCCG CGAGATGCAC
GACGCCATGT ACGGCCCGGA CCAGAACCTC CCGGAACTGG GATTCAGCTC CGGGCACTTC
CCCGCCAAGG TCCTCTCCGC CATCAACGCC GACCTTTCCG GCGCCATGCT CCTCAACCAC
CTTCTCTTGC GCGTGGTACA GAAGAAGTTC GCCTCGGTAG CACTCCAGCC GCTGGGGGAC
CAGGTGCGGG TGCTGGCGCG CGGCGAAGGT AGGACGTCCG AGTTAGGCAA GCTCTCCGCG
ACCCACTACG GGCGGCTCAC CGAGCGCATC CGCCGCCTCT CAGGCATCGG CGGCGCCGAG
GAGAACCCCT CCAGCGGCAT CTTGACCTTC ATCTGGCAGG GGAAAAGGAT CCCGTTCCAG
ACCCTGGTGA TGCCCGGCAA CGGAGGGGAT TACCTCACCT TGAAGCTCCA CGTCGGCGCG
CCGAAAATCT CGGAGCTGGA CGACCTCGGT GTCTCCGCCG GGAAACGCGC GGACCTGAAG
GCGCTCTGCT CGGAAAAGGA GGGGCTGGTC CTCTTCACCG GGCGCGACCC GGAAGAGCGG
AGCCGGCTCA TCGACCTGTT CCTGGATGCC TGCGATCACG CCGACCGCAC CGTCATTTTG
GTGGGGGAAA GGCTTGGTCG CGGCAGGGAC CGCTGGCCGC GGCTGCCGGC GGGAAGATGC
GGCGCGGACG ATACCGCAAA GGTGGTGTCG GCGGCCCTGG AGCATGACCC GGACACCCTG
GTGATCGAGG ACGTCACGGA ACTTGCCTCC TTCATAGCGG CGAGCAAGGC GGTGATGCGG
GGGAAGCTGG TGGTGGCGGG GATGTCCCAG GGGAACAAGG GGGCGGTGTT GAAGCAGCTC
CTGTACCTCT CCCAGAAGAA CTTCCTGATA CCGACCCACC TGAAAGGGGT GGTTTCCTTG
AAGTGCGTGC TGCTCCTTTG CCCGGAGTGC AAGAAGCAGT ACACGCCTGC CGCAGACGAG
CTGGCGGCCT TGCGGCTTAA GGCGACGGCG CCGGAGTATT TCCGCCCGAC CGGCTGTCCC
TCCTGCGACC AGACAGGCTA TAGCGGTAAG AAATACCTCC TGGACGTGAT CCGGTTCGAC
CAGGGGCTCC TGGAGGCGTT CGAGGTGATC CGCGATTCCG ACGAGATCAT CCGCCACCTC
AAAGACAACG GCTACCGGGG CATCGGCGAA GAAGGGGCCG AGCTCCTGGA GCGGGGAGAA
ATATCCCCGG GCGAGTACGT CGCTTCCATA CTACTGTAA
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| Protein sequence | MNGLVKEGSI GEILFKSQII TEQELSAALE EQKVSGCRVG EALVRLGVVA QEDIDWALAN
QLNIPYVRLK KENIDPAAVA KVPGQLARRY SLCPIFLSGS ELSIAMADPL NKEAVEEITR
VTGCQISISV GLIREIREMH DAMYGPDQNL PELGFSSGHF PAKVLSAINA DLSGAMLLNH
LLLRVVQKKF ASVALQPLGD QVRVLARGEG RTSELGKLSA THYGRLTERI RRLSGIGGAE
ENPSSGILTF IWQGKRIPFQ TLVMPGNGGD YLTLKLHVGA PKISELDDLG VSAGKRADLK
ALCSEKEGLV LFTGRDPEER SRLIDLFLDA CDHADRTVIL VGERLGRGRD RWPRLPAGRC
GADDTAKVVS AALEHDPDTL VIEDVTELAS FIAASKAVMR GKLVVAGMSQ GNKGAVLKQL
LYLSQKNFLI PTHLKGVVSL KCVLLLCPEC KKQYTPAADE LAALRLKATA PEYFRPTGCP
SCDQTGYSGK KYLLDVIRFD QGLLEAFEVI RDSDEIIRHL KDNGYRGIGE EGAELLERGE
ISPGEYVASI LL
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