| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0050 |
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| Symbol | tdh |
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| ID | 6782868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 58851 |
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| End bp | 59894 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642766012 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_002136877 |
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| Protein GI | 197116450 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAAGA CCATGCAGGC GCTGGTTAAA AAATACCCTA AGCCCGGGCT GTGGCTCGAC
GAAGTCCCGG TCCCGGAGGT AGGGATCAAC GACGTGCTGA TCAAGGTCCA CAAGACCGCG
GTCTGCGGCA CCGATCTGCA CATCTGGGAC TGGAACGACT GGGCCCGTAA AACCATTCCG
GTCCCCATGG TGGTAGGCCA CGAATTCGTG GGGCGGGTGG CCGCCATGGG CAGCAACGTC
GCCGACCTGA ACATCGGGGA CATCGTCTCC GGCGAGGGGC ACATCGTCTG CGGCAGATGC
CGCAACTGCC TGGCCGGCAG GCGCCACCTC TGCAAGGACA CCAACGGGGT AGGGGTCAAC
CGCGCTGGCG CTTTCGCCGA GTACATCTGC ATCCCGGTCA CCAACGTCTG GCACGCCGAC
CCCACCATAC CCATGGAAAT CCTCGGGATC TTCGATCCCT TCGGCAACGC GACCCACACC
ACCCTGGCCT TTCCCATCCT GGGGGAGGAC GTGCTCATCA CCGGCGCCGG CCCCATCGGC
ATCATGGCGA CGGCCATTGC CCGCCATGCC GGGGCGCGCT ACATCGTGGT AACGGACCTG
AACCAGTACC GTCTCGACTT GGCGAAGAAG ATGGGGGCGA CGGTGGCCCT CAACGTCAGG
GAAGGGACCT TGGCACAGGT GCGGCAGCAG TTGGGGATGA AGGAGGGATT CGACGTGGGG
CTGGAGATGT CCGGAAACGG CGACGCCTTC AAGGAGATGC TGGCCAACAT GTGCCACGGC
GGCAAGATCG CCATGCTGGG GCTTCCCTCG GGGGATCTCG CCGTCGATTG GAACCAGGTG
ATCTTCAACA TGCTGACCAT CAAAGGGATC TACGGCCGGG AGATGTACGA GACCTGGTAC
CTGATGCAGT CCCTGATCAA GATCGGGCTG GATCTCACGC CGGTCATCAC GCACCGGATG
CACTACACGG AGTTCGAAGA GGCGTTCCGG GTGATGAGCA CCGGCAACGC CGGGAAGGTG
ATGCTCAACT GGGTCGAGGA GTGA
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| Protein sequence | MQKTMQALVK KYPKPGLWLD EVPVPEVGIN DVLIKVHKTA VCGTDLHIWD WNDWARKTIP
VPMVVGHEFV GRVAAMGSNV ADLNIGDIVS GEGHIVCGRC RNCLAGRRHL CKDTNGVGVN
RAGAFAEYIC IPVTNVWHAD PTIPMEILGI FDPFGNATHT TLAFPILGED VLITGAGPIG
IMATAIARHA GARYIVVTDL NQYRLDLAKK MGATVALNVR EGTLAQVRQQ LGMKEGFDVG
LEMSGNGDAF KEMLANMCHG GKIAMLGLPS GDLAVDWNQV IFNMLTIKGI YGREMYETWY
LMQSLIKIGL DLTPVITHRM HYTEFEEAFR VMSTGNAGKV MLNWVEE
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