Gene Gbem_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0029 
Symbol 
ID6782847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp35094 
End bp35621 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content63% 
IMG OID642765991 
Productmethyl-viologen-reducing hydrogenase delta subunit 
Protein accessionYP_002136856 
Protein GI197116429 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCTG AAGCTAAACA GCACGATTTC GAGCCGAAGA TAGTCGCTTT CGTCTGCACC 
TGGTGCACCT ACGCCGGTGC GGACCTGGCC GGCACCAGCC GGATGCAGTA CCCGGCCAAC
GTCCGGGTGC TCAAGTTCCC CTGCACCGGC CGCATCGACC CGGTCTTCAT CCTGCGCGCC
TTCCAGAAAG GGGCGGACGG GGTGCTGGTC TCGGGGTGCC ACCCCGGCGA CTGCCACTAC
ATGGCCGGCA ACTTCCACGC CCGGCGCCGT TTTGCGGCCT TCCGTGCCCT GCTTGATTTC
GTCGGGGTCG ACCTGCACCG ACTCCAGTTC TCCTGGGTCT CCGCCGCCGA AGGGGGAAAG
TGGGTCGAAG TGGTGACCGA ACTGACCGAG AGGGTGCGCG CCATGGGACC GATGCTGGAG
TTCAAATCGC TGGAACACGA GGAGCAGTGG TCTGCCTTTC AAGCTATGGC GGACGTCCCC
GGCGTCGTGA ACACGCCTGA ACTCAAAGAG GCTTACGACA AGATATGA
 
Protein sequence
MHAEAKQHDF EPKIVAFVCT WCTYAGADLA GTSRMQYPAN VRVLKFPCTG RIDPVFILRA 
FQKGADGVLV SGCHPGDCHY MAGNFHARRR FAAFRALLDF VGVDLHRLQF SWVSAAEGGK
WVEVVTELTE RVRAMGPMLE FKSLEHEEQW SAFQAMADVP GVVNTPELKE AYDKI