| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_4290 |
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| Symbol | ligB |
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| ID | 6784305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter sp. K |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011145 |
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| Strand | - |
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| Start bp | 4832491 |
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| End bp | 4834032 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 642765757 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_002136622 |
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| Protein GI | 197124671 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCTCG CCGAGCTCGC CGAGGTCTCC CGCGCGGTGG CCGCCACCCC GGCGCGCCTG
GAGAAGGTCG CGCTACTCTC GGAGGCGCTG CGCCGGCTCG CGCCGGACGA GCGCGCGGTG
GGCGCGAGCT GGCTCGCCGG CGACCTGGCC GGCGGGCGCG TCGGGATCGG CGCGGCCACG
CTGCGGGCGG CGCTCGAGGC GGCGCCCCCG GGTGCCGCCG GGCCGGGGCT CACGGTGGGG
GAGGTGGACG CCGCGCTCCG CCGGATCGCC GCCGCGGCCG GTCCGGGATC CGGCGCCGCG
CGGCGCCGGG AGCTGGACGC GCTGCTCGCC CGCGCCGGTG ATCCGGAGCG GCGGTTCCTG
GCGGCCCTCG TCCTCGGCGA GCTGCGCCAG GGCGCGCTGG AGGGCGTCCT CTCCGACGCG
GTGGCGCGGG TCGCGGGGCT CCCCGGCGCC GAGGTGCGGC GCGCAGCGAT GCTCGCCGGC
GCGCTGCCGC CGGTGGCGGA GGCGGCGCTG GCCGAGGGGG CCGCCGGGCT GGCGCGCTTC
CGGCTGCGGG TGGGCGAGCC GGTGTCGCCC ATGCTGGCGC AGACCGCGGC CGGCGTGGAC
GAGGCGCTCC GGGCGCTCGG CGGCGAGGCG GCGCTGGAGT GGAAGCTGGA CGGCGCGCGC
ATCCAGGCGC ACCGCGACGG CGACGAGGTC CGGGTGTTCT CGCGCTCGCT CCGGGAGGTG
ACCGCGGCGG TGCCCGAGGT GGTGGCGCTC CTGCGCGCCG CGCCCGAGCC GCTGCTCGTG
CTCGACGGCG AGGCCATCGC GCTCCGCGCC GACGGCACGC CCGAGCCGTT CCAGGTCACC
ATGCGGCGCT TCGGCAGGAA GCTCGACGTG GAGCGGCTCG CGCCGGACCT GCCGCTGACG
GCGTTCTTCT TCGACGCGCT GGTGGCGGGC GGCGGGGAGC TGCTGGGCGC CCCGGAGCGC
GAGCGCTGGG CGGCGCTCGA GCGGGCGATC CCGGCGGAGC GCCGCGTCCC GCGGCTCGTC
ACGGGCGACG CGGCCGAGGC CCGGGCGTTC CTGGAGGAAG CCCTCGCCCG CGGCCAGGAG
GGCGTGGTGG CGAAGGCGCT CGACGCACCG TACGAGGCCG GCCGCCGCGG CGCCGCGTGG
CTGAAGGTGA AGCGCGCGCA CACGCTCGAC CTGGTGGTGC TCGCGGCGGA GTGGGGCAGC
GGCCGGCGCC GCGGCTGGCT CTCCAACCTG CACCTCGGCG CGCGCGACCC GGCGACCGGG
GAGTTCGTGA TGCTCGGCAA GACGTTCAAG GGCATGACCG ACGCCATGCT GGCGTGGCAG
ACCGAGCGGC TGAAGGCGCT CGCCACCGGC CCGCTCGACG CCTGGCAGGT CCCGGTGCGT
CCGGAGCTGG TGGTGGAGGT CGCGTTCGAC GGGATCCAGG CCAGCCCGCG CTATCCCGGC
GGCCTCGCGC TCCGCTTCGC GCGCGTGAAG CGCTACCGCG AGGACAAGCG CCCCGAGGAC
GCCGACACGA TCGAGACGGT GCGGGGATTG TACGGAGGGT GA
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| Protein sequence | MLLAELAEVS RAVAATPARL EKVALLSEAL RRLAPDERAV GASWLAGDLA GGRVGIGAAT
LRAALEAAPP GAAGPGLTVG EVDAALRRIA AAAGPGSGAA RRRELDALLA RAGDPERRFL
AALVLGELRQ GALEGVLSDA VARVAGLPGA EVRRAAMLAG ALPPVAEAAL AEGAAGLARF
RLRVGEPVSP MLAQTAAGVD EALRALGGEA ALEWKLDGAR IQAHRDGDEV RVFSRSLREV
TAAVPEVVAL LRAAPEPLLV LDGEAIALRA DGTPEPFQVT MRRFGRKLDV ERLAPDLPLT
AFFFDALVAG GGELLGAPER ERWAALERAI PAERRVPRLV TGDAAEARAF LEEALARGQE
GVVAKALDAP YEAGRRGAAW LKVKRAHTLD LVVLAAEWGS GRRRGWLSNL HLGARDPATG
EFVMLGKTFK GMTDAMLAWQ TERLKALATG PLDAWQVPVR PELVVEVAFD GIQASPRYPG
GLALRFARVK RYREDKRPED ADTIETVRGL YGG
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