| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_3648 |
|---|
| Symbol | |
|---|
| ID | 6787333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | - |
|---|
| Start bp | 4106237 |
|---|
| End bp | 4107922 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642765119 |
|---|
| Product | membrane-associated zinc metalloprotease |
|---|
| Protein accession | YP_002135989 |
|---|
| Protein GI | 197124038 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGACC TCCTCCTGAA GATCGGATCC ATCGTCCTCC TCCTCGGGGG GCTCATCTTC
GTCCACGAGC TCGGCCACTT CGTGGTCGCG AAGCTCATGG GCGTGAAGGT CGTCCGCTTC
TCGATCGGCT TCGGGCCCCG GCTGTTCGGG GTCCACCGCG GCGAGACCGA GTACCGGATC
GCGCTCCTGC CGCTGGGCGG CTACGTGAAG ATGGCCGGCG ACGATCCCTC CGAGGCGGTG
GCCCCGGAGG ACGCCGGCCG CGGCTTCCTC GAGCAGCGGC CCTGGAAGCG CCTGCTCATC
GCGGTGGCGG GTCCGGCCGC GAACCTGATC TTCCCCGGCG TCATCTACGT CGCGCTGGCG
CTCGCCCAGA ACGGGGAGCC GGCCCCCGGC CCGGTGGTCG GTACCGTCGC GCCCGGGACC
CCGGCCGCAG AGGCCGGCAT GCAGCCCGGC GATCGCATCC TGAGCGTGGC CGCGCCCGGC
CAGGCCGCCG ACCCGGTGCG CTACTTCTCC GACCTGCGCG ACCTCGTGTC GCCGCACCCC
GGCGAGCCGC TCACCTTCCG GATCGAGCGC GACGGCGCGC AGCGGGCGCT CACCATCACC
CCGGCGAGCG AGCAGGAGTC GAACCCCATC GAGTCCACGC GGCGCGGCGT GATCGGCGTG
ACGCCGACGT ATCCGAGCGC GGTGGTGGCC CCGGTGCGGC CCGGCCTCGC CGGCCCGCTC
GAGCCGTTCG ACCTCGTGAT CGCCGCCGGC GGGAAGCCGG TGCGCCACGC GGGCGACCTC
GAGCACGCGG TGGCCGCGGC GCGCTGCGGC CCGCTCGACC TCGAGGTGGT GCGGGAGTCG
CCGCGGACGC TCCCGGGCGT GGCGCTCGCC GACCACCGCG CGGTCTCGCT CCCGCAGGTG
CCCACCTGCG CCGCCGGCGA GCGCACGTTC GCGGTGGCGG ATCCAGCGGT GTCCACGTTC
ATCGCCACCG TGGTCCCGGG CAGCCCGGCC GAGAAGGCGG GGCTTCGCCG CGGCGACGCC
ATCGCCTCGG TGAACGGCAA GCCGGTCCGC TCGTTCCTCC GGGACGTGAA CGCGTTCGGG
CGCGACTTCC TGAAGGCCGG GACCCCGGTG CAGCTCGGGC TCGCCGACGG CCGCACGGTG
GCGCTCGTGC CGGCGAACGA GACCTACCGC GACGAGATCA CCGGCGAGCC GGCGCAGCGC
CTGGTGCTGG GCTTCCAGCC GGACCAGCGC GACGCGGTGG ATCCGCTGGC GCTGCTGGCG
GAGCAGGTGC CGCTCGCGCG CGGCGCGGTG GAGGCGTTCC AGCTCGCCTG GCGGCAGCTC
CACGAGGTGG TGCGGCTCAC CGTGCTCGGC ATCGTCCGCA TCGTCACCGG CGACATCAGC
TTCAAGACGG TGGGCGGGCC CATCATGCTG TTCTCCATCG CCTCGGAGGC GGCGGAGGAG
GGCTGGGGCT CGTTCCTGTT CAAGATGGCG CTCATCAGCG TGAACCTCGG CCTGATGAAC
CTGCTGCCGA TCCCGGTGCT CGACGGCGGC CACATCGCGC AGGCGGCGCT GGAGGGCGTC
ACCCGGCGGC CGCTCTCGGT GCGGACGCGT GAGCTCGCGA ACATCGTCGG CATCGTGCTG
CTGTTCACGC TCATGCTGTT CGTGTTCAAG AACGACATCG TGCGCCTCAT GCGGCCGATG
GAGTAG
|
|---|
| Protein sequence | MPDLLLKIGS IVLLLGGLIF VHELGHFVVA KLMGVKVVRF SIGFGPRLFG VHRGETEYRI
ALLPLGGYVK MAGDDPSEAV APEDAGRGFL EQRPWKRLLI AVAGPAANLI FPGVIYVALA
LAQNGEPAPG PVVGTVAPGT PAAEAGMQPG DRILSVAAPG QAADPVRYFS DLRDLVSPHP
GEPLTFRIER DGAQRALTIT PASEQESNPI ESTRRGVIGV TPTYPSAVVA PVRPGLAGPL
EPFDLVIAAG GKPVRHAGDL EHAVAAARCG PLDLEVVRES PRTLPGVALA DHRAVSLPQV
PTCAAGERTF AVADPAVSTF IATVVPGSPA EKAGLRRGDA IASVNGKPVR SFLRDVNAFG
RDFLKAGTPV QLGLADGRTV ALVPANETYR DEITGEPAQR LVLGFQPDQR DAVDPLALLA
EQVPLARGAV EAFQLAWRQL HEVVRLTVLG IVRIVTGDIS FKTVGGPIML FSIASEAAEE
GWGSFLFKMA LISVNLGLMN LLPIPVLDGG HIAQAALEGV TRRPLSVRTR ELANIVGIVL
LFTLMLFVFK NDIVRLMRPM E
|
|---|
| |