Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AnaeK_3011 |
Symbol | |
ID | 6784140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. K |
Kingdom | Bacteria |
Replicon accession | NC_011145 |
Strand | - |
Start bp | 3356489 |
End bp | 3358468 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642764483 |
Product | polysaccharide deacetylase |
Protein accession | YP_002135362 |
Protein GI | 197123411 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.245243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCTGC GACCCGTGTC ACTCCCCGCC GCGGCGCTGC TGCTCGCCGC CGCCGCGCTG CCCGCCTCGC GGACCCTCGC GGCGACCGAG GAGGAGCTGA CCATCCTCAG CTACCACGAG GTGGCGGATC GCGCGGAGGC GCTGGTCCCG CAGTACGCCG TCTCGCCGAC CGCCTTCCTG CGGCAGATGG ACTGGCTCCG CAACCACGGC TACCGCTTCG TCTCGGTGGA CGACCTGCTG GCGGCGCGCG AGGGGCGCCG GCCGCTGCCG CCGAAGGCGG TGCTCGTCAC CTTCGACGAC GCGTACCAGT CGGTCTACCG GAACGCCTGG CCGGTCCTGA AGATGTTCCG CATCCCGGCG GTCATCAACG TGGTGGCCGG GTGGCTCGAG GAGAAGGGGA CCGTCGACTT CGACGGCAAG AAGCTGCCGC GGGAGCGGCT CCTCTCCTGG AGCGAGCTGC GCGAGCTCGC CGCCAGCGGC CTGGTCGAGG TGGGCAGCCA CAGCTTCGAC CTGCACAAGG GCATCCTGGG CAATCCGCAG GGCAACCTGG AGCCGGCCGG CACCACGCGA CGCTACGACG CGGGCGCGCG GCGCTACGAG GACGAGGCCA CCTATCGCCG GCGCGTCCAG GCGGACCTGG AGCGCAGCGT GGCGCTCATC CGGCGCAACA CCGGCCGGGC GCCGCGCGTC GTCGCCTGGC CCTACGGGCG CTACAACGCG ACCACGCGGG AGACCGCCGA GCGGCTCGGG ATGCGCGTCG GCCTGACGCT GGACGACGGC GCGAACACCC GCGACACGCC GCTGTGGGGC CTGCGCCGCA TCCTGGTCGA GGGCGGGATG GCGCTCTGGG ACGTCGAGCG CGAGATCGCC ATCCGCAACG CGGACCTCTC GGACAACGAC CGCCCGCAGA AGGTCATGCA CGTGGACCTG GACTACGTGT ACGACCCGGA TCCGGCGCAG CAGGAGCGCA ACCTCGGTCA CCTGCTCGAC CGCATCGCCG CCATGGGCGT GAACGCGGTC TACCTGCAGG CGTTCTCGGA TCCGGACGGC AACGGCTCGG CGGACGCGGT GTACTTCCCG TCCCGCCGCA TGCCGATGCG CGCCGACCTG TTCAACCGGG TGGCCTGGCA GATCCGGACG CGCACGCCGG TGAAGCGGCT GTACGCGTGG ATGCCGCTGC TGGCATGGGA GCTGCCGAAG GGCGACCCGG CCGCGCAGGA CCAGGTGGTG ACGCTGGCCG GCGACCGCAC CGACCGCGTG AACATGGGCT ACCACCGGCT CTCGCCGTTC TCGGCGCGGG CGCGCGAGGC GATCCGCGAG CTGTACCAGG ACCTGGCGCG CTCGGCCCCG TTCGACGGAC TGCTCTTCCA CGACGACGCC ACGCTCTCCG ACTACGAGGA CGCCAGCCCC GCGGCGCTGG CGCAGTACCG GGCCTGGAGC CTGCCCGGGA GCATCGAGGA GATCCGCCGG AGCGACGACC TGCTGGGCCG GTGGACCATC CTCAAGATCA ACGCCATCGA CGACCTCGCC ATGGACGCCG CCGCGGCGGT GCGCGCGCAG CAGCCCGCGC TGGTGGTGGC GCGCAACCTC TACGCGCGGG TGGCGCTCAA CCCCAGGGCG GAGGTCTGGT ACTCGCAGGC GCTCGACAAC TCCATCGCCC GCTACGACTT CACCGCCATC ATGGCCATGC CCTACATGGA GAAGGCCGCC GACCACGCCG CCTTCTTCCA CGAGCTGGTG CGGGCGGTCG AGTACCGCGA CGCGATGAAG AAGGTGGTGT TCGAGCTGCA GGCGGTGGAC TGGCGCGACG GCAACAAGCC CATCCCCAGC CGCGAGCTCG CCGAGACCAT CCGCTCGCTC TACGCGATGG GCGTCATGCA CGTCGGCTAC TACCCCGACG CGCTGTTCGC CGGGCAGCCC GATCCGCGGG TCCTGAAGCC GGTGCTCGAC TCGAAGCCGA ACGCTCCCGC GGTTCGCTGA
|
Protein sequence | MTLRPVSLPA AALLLAAAAL PASRTLAATE EELTILSYHE VADRAEALVP QYAVSPTAFL RQMDWLRNHG YRFVSVDDLL AAREGRRPLP PKAVLVTFDD AYQSVYRNAW PVLKMFRIPA VINVVAGWLE EKGTVDFDGK KLPRERLLSW SELRELAASG LVEVGSHSFD LHKGILGNPQ GNLEPAGTTR RYDAGARRYE DEATYRRRVQ ADLERSVALI RRNTGRAPRV VAWPYGRYNA TTRETAERLG MRVGLTLDDG ANTRDTPLWG LRRILVEGGM ALWDVEREIA IRNADLSDND RPQKVMHVDL DYVYDPDPAQ QERNLGHLLD RIAAMGVNAV YLQAFSDPDG NGSADAVYFP SRRMPMRADL FNRVAWQIRT RTPVKRLYAW MPLLAWELPK GDPAAQDQVV TLAGDRTDRV NMGYHRLSPF SARAREAIRE LYQDLARSAP FDGLLFHDDA TLSDYEDASP AALAQYRAWS LPGSIEEIRR SDDLLGRWTI LKINAIDDLA MDAAAAVRAQ QPALVVARNL YARVALNPRA EVWYSQALDN SIARYDFTAI MAMPYMEKAA DHAAFFHELV RAVEYRDAMK KVVFELQAVD WRDGNKPIPS RELAETIRSL YAMGVMHVGY YPDALFAGQP DPRVLKPVLD SKPNAPAVR
|
| |