| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_2912 |
|---|
| Symbol | |
|---|
| ID | 6785020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | - |
|---|
| Start bp | 3261237 |
|---|
| End bp | 3262199 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642764386 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_002135265 |
|---|
| Protein GI | 197123314 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAGG TGATGATCGC CGCGGCCGCC GTGGCCATCT TCGCGGGCCT CGAGGCGGCC
TACCACCTCG CGCGCTATTT CGCGGACCGG CGCTCCGCGG AGCTGCGGCG GCGCTTGCAC
GCCATCGGCC GCGGCAGCGC GCTCGACGCG GACCTGCTGC GGCGCGGGCG GCTCGCGAAG
GCCCCGGCCC TGCAGCAGGT GCTCGAGCAG GTGCCCGGCG CGCGGAGGCT CGAGCGGCTC
CTGGAGCAGG CGGACTCGAG CTGGACCGTG GCGAGGCTCG GGGCGCTCAC GCTGGCGGGT
GGTCTGGTCG CCGCGCTGAT CGGCGTCAGC CTGCGGTCCG GCGCGGTCGG CATCGGGGGC
CTGGCCGCGG GTGGCGCCGC GCTGCCGATC GTGGGGGTGC TCTCGGCACG GGCGAAGCGC
AGCGCGAAGC TCTCGGAGCA GCTCCCGGAG GCCCTCGACA TGATGGCGCG GTCGCTGCGC
GCCGGCCACG CGGTCACCGC CGCCTTCCAG GTGGTGGCGA GCGAGATGCC GGAGCCCGTC
AGCGTGGAGT TCGCCCGTGC GTACGAGGAG CAGCGGCTCG GCCTCACGCT GGAGCGGGCC
GTGGTGCAGA TGTCGGAGCG CTGCCCCGGG AACGGCGACA TGAAGATCTT CGCCGTGTCC
GCGGTGATCC AGCGCGAGAC CGGCGGCAAC CTCGCGGAGA TCCTCGATCA GATCGGCGAG
ACGATTCGCC AGCGTTACCG CTTCTACGGC AAGCTCCGCG CGCTGACCGG CGAGGGGCGC
GCCTCGGCGG TGATCCTCGG CGCGCTGCCC TTCGCGGTGG CGGTGGCCCT CTCGATCCTG
AACCCCGAGT ACCTGATGGT CCTCCCGGGC ACGGCCAAGG GACAGATGAT CATCCTGGGC
GCGTCGGTGA GCTGGGTGGT CGGGCTCCTC TGGCTCTACC GCCTCACGCA GGTGGATCTC
TAG
|
|---|
| Protein sequence | MREVMIAAAA VAIFAGLEAA YHLARYFADR RSAELRRRLH AIGRGSALDA DLLRRGRLAK
APALQQVLEQ VPGARRLERL LEQADSSWTV ARLGALTLAG GLVAALIGVS LRSGAVGIGG
LAAGGAALPI VGVLSARAKR SAKLSEQLPE ALDMMARSLR AGHAVTAAFQ VVASEMPEPV
SVEFARAYEE QRLGLTLERA VVQMSERCPG NGDMKIFAVS AVIQRETGGN LAEILDQIGE
TIRQRYRFYG KLRALTGEGR ASAVILGALP FAVAVALSIL NPEYLMVLPG TAKGQMIILG
ASVSWVVGLL WLYRLTQVDL
|
|---|
| |