| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_2347 |
|---|
| Symbol | rpsA |
|---|
| ID | 6787815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | - |
|---|
| Start bp | 2628698 |
|---|
| End bp | 2630404 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642763814 |
|---|
| Product | 30S ribosomal protein S1 |
|---|
| Protein accession | YP_002134703 |
|---|
| Protein GI | 197122752 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0539] Ribosomal protein S1 |
|---|
| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.139373 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAATC AGACTCCCCG CACGCCCGAC GTCGAGACCG AGGACTTCGC GACGCTCTTC
GCCGCGAGCG AAGCCAGCGC CGGTCCGATC GAGGAGGGCA AGGTCGTCAA CGGCACCGTC
ATCCAGCTGA CCAAGGACTA CGCCGTCATC GACATCGGCT ACAAGTCCGA AGGCCAGGTG
CCCATCTCCG AGTTCTCGAC CGCCCCCGGC GGCGAGCCCG CGGTGAAGGT GGGCGACAAG
GTCGAGGTGC TCGTCGAGTC CCGGGAGAAC GACACCGGGA TGGTCGTCCT CTCCAAGGAG
AAGGCCGACA AGATGCGCAT CTGGGACGAG ATCTCCGCCG CGTGCGAGCG CGACGAGCTC
GTCGAGGGCG TGATCGTCGG GCGCGTGAAG GGCGGCCTCT CCGTCGACAT CGGCGTGAAG
GCGTTCCTCC CCGGTTCGCA GGTCGACATC CGGCCGGTCC GGAACCTGGA CAAGCTGATC
GGCGAGAAGT TCAAGTTCAA GGTCATCAAG TTCAACAAGA AGCGCGGGAA CATCGTGCTG
TCGCGCCGGG TCCTCCTCGA GAAGGAGCGC GAGGAGCTGA AGAAGGAGAC CCTGAAGAAC
CTGAAGGAGG GCGCGATCCT CAAGGGCGTG GTCAAGAACC TCACCGACTA CGGCGCGTTC
ATCGACCTGG GCGGCATCGA CGGCCTGCTG CACGTCACCG ACATGAGCTG GGGCCGCATC
GGCCACCCGT CGGAGATGTT CGAGGTCGGC CAGGAGGTCC GCGTCGTCGT CCTGAAGTTC
GACCCGACCT CCGAGCGCGT CAGCCTGGGC CTGAAGCAGA TCCAGGAGGA TCCGTGGCAC
CGCGCCGACG AGAAGTATCC GGTCGGCACG CGCGTCAAGG GCAAGGTGGT CTCGCTCACC
GACTACGGCG CGTTCATCGA GCTGGAGCAG GGCGTCGAGG GTCTCGTCCA CGTCTCCGAG
ATGAGCTGGA CGAAGCGGGT GAAGCACCCC TCGAAGCTGG TCAACGTGGG CGACCAGGTC
GAGGCGGTGG TGCTCGACAT CGACCCGAAG GCCAAGCGGA TCAGCCTCGG CATGAAGCAG
ATCGAGGCGA ACCCCTGGAC GCTGCTCGAG GACAAGTATC CGATCGGCAC GACGATCCGC
GGCGAGGTCC GCAACGTCAC CGACTTCGGC ATCTTCGTCG GCGTCGAGGA GGGCATCGAC
GGCCTCGTGC ACGTGTCCGA CATCTCCTGG ACCGAGCGCA TCAAGCACCC GGGCGAGAAG
TTCAAGAAGG GTGACGTGGT CGAGGCGGTG GTGCTCAACA TCGACGTCGA GAACGAGCGC
TTCAGCCTCG GCATCAAGCA GGCGCACGTC GACCCGTGGA CCACGCTCTC CGAGCGTCAC
CCGGTGGGCG CCCGCGTGAA GGGCCGCGTC ACCAAGGTCA CCGACTTCGG CGCGTTCGTG
GAGATCGAGC CGGGCATCGA GGGCCTGGTG CACGTGTCCG AGATGAAGGA CGAGCGCGTG
GAGAACCCGC GCGACGTCGT GCAGGAGGGC CAGGAGGTCG AGGTCAAGGT CATCGACATG
GACCTCCAGG ACCGCAAGGT CGCCCTCTCC ATGAAGGCGG TCAACCGCGA CGGCGGCGAG
GACGACTACC GCGAGTACCT GCGCCGCCAG GGCGACGGCC GCGCCCGCCT CGGCGACCTG
ATGGAGAAGT TCAACCGCCG CAAGTAG
|
|---|
| Protein sequence | MENQTPRTPD VETEDFATLF AASEASAGPI EEGKVVNGTV IQLTKDYAVI DIGYKSEGQV
PISEFSTAPG GEPAVKVGDK VEVLVESREN DTGMVVLSKE KADKMRIWDE ISAACERDEL
VEGVIVGRVK GGLSVDIGVK AFLPGSQVDI RPVRNLDKLI GEKFKFKVIK FNKKRGNIVL
SRRVLLEKER EELKKETLKN LKEGAILKGV VKNLTDYGAF IDLGGIDGLL HVTDMSWGRI
GHPSEMFEVG QEVRVVVLKF DPTSERVSLG LKQIQEDPWH RADEKYPVGT RVKGKVVSLT
DYGAFIELEQ GVEGLVHVSE MSWTKRVKHP SKLVNVGDQV EAVVLDIDPK AKRISLGMKQ
IEANPWTLLE DKYPIGTTIR GEVRNVTDFG IFVGVEEGID GLVHVSDISW TERIKHPGEK
FKKGDVVEAV VLNIDVENER FSLGIKQAHV DPWTTLSERH PVGARVKGRV TKVTDFGAFV
EIEPGIEGLV HVSEMKDERV ENPRDVVQEG QEVEVKVIDM DLQDRKVALS MKAVNRDGGE
DDYREYLRRQ GDGRARLGDL MEKFNRRK
|
|---|
| |