| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_2274 |
|---|
| Symbol | rplA |
|---|
| ID | 6788352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | - |
|---|
| Start bp | 2557463 |
|---|
| End bp | 2558167 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642763734 |
|---|
| Product | 50S ribosomal protein L1 |
|---|
| Protein accession | YP_002134630 |
|---|
| Protein GI | 197122679 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCACG TTGCGAAGAA GTACAAGGCG GCCGCCGAGA AGGTGGATCG CACCAAGCGC
TACAAGCTCG ACGAGGCGAT GAGCCTCGTG AAGCAGACCG CCACCAAGAA GTTCGACGAG
ACGGTGGACG CGTCCATCAA CCTGGGCGTG GACCCGAAGC ACGCCGACCA GGTGGTCCGC
GGCGCCGTCG TGCTGCCGCA CGGCATGGGC AAGACCGTCC GCCTGGCGGT GTTCGCGAAG
GGCGACAAGG CCAAGGAGGC CCAGGAGGCC GGCGCGGACA TCGTCGGCGC CGAGGACCTG
GCCGAGAAGA TCCAGGGCGG CTTCATGGAC TTCGACAAGC TCATCGCCAC CCCGGACATG
ATGGGCGTGG TCGGCCGCCT CGGTAAGATC CTCGGGCCCC GCGGCCTCAT GCCGAACCCG
AAGGTCGGCA CCGTCACGAT GGACCTCGCC CGCGCCGTCA AGGAGCAGAA GGCCGGCAAG
GTCGAGTTCC GCGTCGAGAA GGCGGGCATC GTCCACGTGC CGTTCGGGAA GGCCTCCTTC
GATCCGGACA AGCTGAAGGC GAACTTCAGC GCGATCATGG AGGTCATCTA CAAGGCGAAG
CCGCAGACGG CGAAGGGCGT GTACGTCAAG AACGTCACCC TGAGCACGAC CATGGGCCCC
GGCATCAAGG TGGACCTGGC GGAGCTCGCC GCGCAGCACG CCTAG
|
|---|
| Protein sequence | MAHVAKKYKA AAEKVDRTKR YKLDEAMSLV KQTATKKFDE TVDASINLGV DPKHADQVVR
GAVVLPHGMG KTVRLAVFAK GDKAKEAQEA GADIVGAEDL AEKIQGGFMD FDKLIATPDM
MGVVGRLGKI LGPRGLMPNP KVGTVTMDLA RAVKEQKAGK VEFRVEKAGI VHVPFGKASF
DPDKLKANFS AIMEVIYKAK PQTAKGVYVK NVTLSTTMGP GIKVDLAELA AQHA
|
|---|
| |