Gene AnaeK_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnaeK_2178 
Symbol 
ID6788222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. K 
KingdomBacteria 
Replicon accessionNC_011145 
Strand
Start bp2450337 
End bp2450927 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content75% 
IMG OID642763638 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002134534 
Protein GI197122583 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.103382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGTCCCT CACTGTCCGG CGAGGCCGCG TGGACGCGGG CGGCCGCGCG AGGCGACCGG 
CAGGCCTTCT CACGGCTGGT GGACCTGCAC AAGCGCACGG TGTTCGCCCT CTGCGTCCGG
CTGCTGCGGG ACCAGGACGA GGCGCAGGAC GCCGCCCAGG AGGCGTTCGC GCGCGCCTAC
GCGAGCCTGG CCGCGTTCGA TCCCTCGCAG CCGTTCGCGC CCTGGCTGCT CCGCATCGCC
CGCAACCACT GCCTCGACGT GCTCCGCCGC CGCCTGCCGC AGGCGCAGCG GGTCGAGCTG
GACGCGGCCC CGGAGGACGG CGCGCCGCGC GATCTCGCCG ACCCGGACGC GCCCCGCGGC
GACGACGCGC TGGAGCGCCG CGAGCTGGCG CGCACCATCG AGGCCGCGGT CGCGGCCCTG
CCGGCGAACT ACCGCGAGGT CGTGCACCTC TTCCACGTCG AGCACCTCTC CTACAAGGAG
ATCGCCGCCG CCATGGACGT CCCCATCGGC ACCGTGATGA CCTGGCTGCA CCGCGCCCGC
GCGCGGCTCA AGGCGACCCT CGACGCGAGC GCCCCGGAGA TCACGCCATG A
 
Protein sequence
MGPSLSGEAA WTRAAARGDR QAFSRLVDLH KRTVFALCVR LLRDQDEAQD AAQEAFARAY 
ASLAAFDPSQ PFAPWLLRIA RNHCLDVLRR RLPQAQRVEL DAAPEDGAPR DLADPDAPRG
DDALERRELA RTIEAAVAAL PANYREVVHL FHVEHLSYKE IAAAMDVPIG TVMTWLHRAR
ARLKATLDAS APEITP