| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_2085 |
|---|
| Symbol | |
|---|
| ID | 6788290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | + |
|---|
| Start bp | 2345790 |
|---|
| End bp | 2346824 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642763545 |
|---|
| Product | porin Gram-negative type |
|---|
| Protein accession | YP_002134442 |
|---|
| Protein GI | 197122491 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAGC TCGTCTCGGC AGCGCTCTTC GCCTGCCTCG TCGCCGCCCG CCCCGCCGCC
GCGGAGCCGC CCGCCATCAC CATCTACGGC AAGATGGACG TCGGCTACGC CCACGTGCAG
GGCGCGAACG GCGCCGTCCC GCACCAGACC CCCACCGACC TCGTCGAGTC CGGCCAGCTC
TCCGGCAGCC GCCTCGGCTT CAAGGCCACC GAGGACCTCG GCAACGGCGT CAGCGCCCTG
TTCCTGGTGG AGACCGGCGT CAGCCTCGAC ACCGGCAGCT CGACCAGCGC GCAGTTCTGG
GGCCGCCAGG CCTACGCCGG GCTGACCGGC GCCTGGGGGA AGGTCACCGT GGGCCGCCAC
CAGACCCCGG GCTACTGGGT CCAGTGCGAC GTCGACCCGT TCGAGATCGG CACCGTCGGC
AACATCGAGA ACCTGCTCAA GCGGCAGTCG CGCACCGACA ACTCGGTCCA GTACGTCACG
CCCACGTTCG CGGGCCTCGA GCTGACCGCG CTCTGGGCGC AGAACCGCGC CGGACCGGAG
ACCGAGGGGA ACGGCGACGA CACGCCCGGC TTCTCCGGCG GCCTGCGCTG GCGGTACGGC
CCGGTGCTCG CCGCGGTCGC GTACTACCAG GACAAGAGCA AGGTGACCGA CGTCATCACC
CGCATCGGCA ACGCCGGCGC GACCTGGGAC CTCGGCTTCC TGAAGCTGCA CGCGTCGGGC
GGCTTCTACC GGCTGAGCGA CGACACGGTC CAGCAGAGCA GCGCGCTCGC CGGCCTGACG
GTGCCCGTGC CGGTGCTCGG CGGCAGCGTG CGCGCCTCGT ACTCGCAGAT GTGGGAGGAC
GCCGCGGACG ACGCGGGCGC CTCCAAGGTC GCGGTCGGCT ACATCCGTCC CCTCGCGAAG
AAGACCGACG TGTACCTGGT CTTCGCGCAC ATCGAGAACG AGCGGAACGG CACCAAGACG
TTCGACATCA CCGACGCCAT CGCGAAGGCG GGCGGGGTGG ACGGCGTCTC TGCCGGCCTG
CGGTACGCGT TCTAG
|
|---|
| Protein sequence | MRQLVSAALF ACLVAARPAA AEPPAITIYG KMDVGYAHVQ GANGAVPHQT PTDLVESGQL
SGSRLGFKAT EDLGNGVSAL FLVETGVSLD TGSSTSAQFW GRQAYAGLTG AWGKVTVGRH
QTPGYWVQCD VDPFEIGTVG NIENLLKRQS RTDNSVQYVT PTFAGLELTA LWAQNRAGPE
TEGNGDDTPG FSGGLRWRYG PVLAAVAYYQ DKSKVTDVIT RIGNAGATWD LGFLKLHASG
GFYRLSDDTV QQSSALAGLT VPVPVLGGSV RASYSQMWED AADDAGASKV AVGYIRPLAK
KTDVYLVFAH IENERNGTKT FDITDAIAKA GGVDGVSAGL RYAF
|
|---|
| |