Gene AnaeK_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnaeK_1960 
Symbol 
ID6788017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. K 
KingdomBacteria 
Replicon accessionNC_011145 
Strand
Start bp2212061 
End bp2213083 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content66% 
IMG OID642763417 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_002134317 
Protein GI197122366 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGATC CGATCGTCAC GAAGAACTGG CGGGACCTCA TCAAGCCCCG CGGCCTGGTC 
GTCGACCAGG ACAGCCTCTC GAACACCTAC GGGAAGTTCG TCGCGGAGCC GCTCGAGCGG
GGCTTCGGCA TCACCCTCGG CAACTCGCTC CGGCGCGTGC TGCTCTCGAG CCTGCAGGGC
GCCGCGATCA CCTCGGTGAA GGTCGAGGGC GTCGAGCACG AGTTCATGAC CATCCCCGAG
GTGGCCGAGG ACGTCACCGA CATCATCCTC AACCTCAAGG AAGTGCTGCT CCAGATCCAC
ACCAACGACG TGAAGACGAT CCGGATCGAG GCGGACGGCC CGAAGGAGAT CAAGGCCGGC
GACCTCATCA CGGACGCGCA GGTCGAGGTG CTGAACCCGG GCCACCACAT CCTCACCATC
AGCGAGGGCG GGCGGGTCCG CGCCGAGATG ACCGCGCGCC GCGGCCGCGG CTACGTCCCG
GCCGAGCGGA ACAAGATCCC CGGCTCGCCG ATCGGCACCA TCCCCATCGA CGCGCTCTTC
AGCCCCATCC GCAAGGTGAA CTACCAGGTC ACCAACGCGC GCGTCGGGCA GCAGACCGAC
TACGACAAGC TGACGCTCGA GGTCTGGACC GACGGCTCGG TCGCCCCGGC CGACGCGGTC
GCCTTCGCCG CGAAGATCGT GAAGGAGCAG CTCTCGATCT TCATCAACTT CGACGAGGCG
GAGGAGCCGG CCGAGGAGAT CAAGCCGGTC GAGGAGCAGA AGCTGAACGA GAACCTCTTC
CGCTCGGTGG ACGAGCTGGA GCTCTCGGTC CGCAGCGCGA ACTGCCTGCA GAACGCGAAC
ATCAAGACCA TCGGCGACCT CGTTCAGAAG ACCGAGGCCG AGATGCTCAA GACGAAGAAT
TTCGGCCGGA AGTCGCTGAA GGAGATCAAG GAGATCCTGG CCGAGATGGG CCTCTCCCTC
GGCATGAAGC TCGAGAACTG GCCGCCGAAG GCGGCGCCGC AGGGCGGCGC GCCCAAGGTC
TAG
 
Protein sequence
MVDPIVTKNW RDLIKPRGLV VDQDSLSNTY GKFVAEPLER GFGITLGNSL RRVLLSSLQG 
AAITSVKVEG VEHEFMTIPE VAEDVTDIIL NLKEVLLQIH TNDVKTIRIE ADGPKEIKAG
DLITDAQVEV LNPGHHILTI SEGGRVRAEM TARRGRGYVP AERNKIPGSP IGTIPIDALF
SPIRKVNYQV TNARVGQQTD YDKLTLEVWT DGSVAPADAV AFAAKIVKEQ LSIFINFDEA
EEPAEEIKPV EEQKLNENLF RSVDELELSV RSANCLQNAN IKTIGDLVQK TEAEMLKTKN
FGRKSLKEIK EILAEMGLSL GMKLENWPPK AAPQGGAPKV