Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AnaeK_1959 |
Symbol | rpsD |
ID | 6788016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. K |
Kingdom | Bacteria |
Replicon accession | NC_011145 |
Strand | + |
Start bp | 2211244 |
End bp | 2211870 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642763416 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_002134316 |
Protein GI | 197122365 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCCGTT ACAGCGAAAG CGTCTGCCGG CTCTGCCGCC GGGAAAACCT CAAGATGTAT CTCAAGGGCG ATCGGTGCTA CACCGACAAG TGCGCCATCG AGCGCCGCCC GTATCCTCCC GGCCAGCACG GCCAGGGCCG GACCAAGTTC TCCGAGTACG GCGTCCAGCT CCGCGAGAAG CAGAAGGTGA AGCGGATGTA CGGCCTGCTC GAGGCCGGGT TCCGCCACGC CTACCAGAAC GCGGCGGCCG CCAAGGGCAA GACCGGCGAG AACCTGCTGC AGACCCTCGA GCTCCGGCTC GACAACGTGG TCTTCCGGCT CGGCTTCGCG GACACCCGCA ACGAGGCCCG GCAGCTGGTC CGCCACGGCC ACTTCAAGGT GAACGGCCGC AAGGTCAACA TCCCCAGCTA CCTGTGCCGG CCCGGCGACA AGGTGGAGCT GAAGGACCGC TCGAAGAAGG TGGTCCGGAT CACCGAGGCG CTCGAGGCGG TGGACCGCCG CGGCGTGCCG GCGTGGCTCG ACCTGGACAA GGGCGGCTTC AAGGGCACCG TGAAGACCTC GCCGGCGCGC GAGGACATCA CCATGCCGAT CCAGGAGCAG CTGATCGTCG AGCTGTACTC GAAGTAG
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Protein sequence | MARYSESVCR LCRRENLKMY LKGDRCYTDK CAIERRPYPP GQHGQGRTKF SEYGVQLREK QKVKRMYGLL EAGFRHAYQN AAAAKGKTGE NLLQTLELRL DNVVFRLGFA DTRNEARQLV RHGHFKVNGR KVNIPSYLCR PGDKVELKDR SKKVVRITEA LEAVDRRGVP AWLDLDKGGF KGTVKTSPAR EDITMPIQEQ LIVELYSK
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