| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_1887 |
|---|
| Symbol | |
|---|
| ID | 6784558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | - |
|---|
| Start bp | 2152720 |
|---|
| End bp | 2153643 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642763343 |
|---|
| Product | putative RNA polymerase, sigma 70 family subunit |
|---|
| Protein accession | YP_002134244 |
|---|
| Protein GI | 197122293 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
|---|
| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCC AGAGCGTCCC GGGTACCGCG AGCTCCCTCG AGGTCTACCT CTCGGAGATC
AATCGGTTTC CGCTGCTGAC GGTCGAGGAC GAGCAGCGGC TGGCGCGCCA GTACTGCGCA
GATCGCGACA CCCGCGCCGC CCACCGGCTG GTCACCGCGA ACCTCCGCTT CGTGGTCAAG
GTCGCCTACG AATACCGCTC CTACGGGTTC CGCATGGCCG ACCTCATCCA GGAGGGCAAC
ATCGGCCTGA TGAAGGCGGT CCAGAAGTTC GATCCGGACA AGGGCATCCG CCTCATCTCG
TACGCGGTCT GGTGGATCCG CGCGTACATC CAGAACTACA TCCTCAAGTC CTGGTCGCTG
GTGAAGCTCG GGACGACGCA GGCGCAGCGC AAGCTGTTCT TCTCGCTGGC CCGCACGAAG
CGCGAGCTCG ACAAGCGGTC CCAGGAGCAC GGCGCCGACT CCGACGGGCA CGACGCGAAC
AAGGTGGCGA AGAAGCTCCG CGTGAAGCCC GGCGAGGTCC GCGAGATGGA GCAGCGGATG
GAGGGGCGCG ACCTGTCGCT CGACGCGCCC ATGGGCGACG ACGGCGGCTA CTCCCACGTG
GACTTCCTCC CCTCCGGCAC CGCCTCGCAG GACGACGAGC TGTCCGGCGT GCAGGAGCAG
AAGGTCGTCT CCGGCCGGGT CGGCGAGGCG CTGGGTCGCC TCGACCAGCG CGAGCGCTAC
ATCATCGAGA TGCGCGTCAT GAGCGACCGC CCGCTCACGC TCAAGGAGCT GGGCGAGCAC
TTCGGCTTCT CGCGCGAGCG CGCCCGGCAG CTCGAGATCC GCGCCAAGGA GAAGCTGAAG
GAGGAGCTGC GCGCGCTCGC GACGGAGATC GACTGGCCCA CCGACGGCGC GCCGGTGGAC
ATCGACGACC GCGCGCTGGC CTGA
|
|---|
| Protein sequence | MKRQSVPGTA SSLEVYLSEI NRFPLLTVED EQRLARQYCA DRDTRAAHRL VTANLRFVVK
VAYEYRSYGF RMADLIQEGN IGLMKAVQKF DPDKGIRLIS YAVWWIRAYI QNYILKSWSL
VKLGTTQAQR KLFFSLARTK RELDKRSQEH GADSDGHDAN KVAKKLRVKP GEVREMEQRM
EGRDLSLDAP MGDDGGYSHV DFLPSGTASQ DDELSGVQEQ KVVSGRVGEA LGRLDQRERY
IIEMRVMSDR PLTLKELGEH FGFSRERARQ LEIRAKEKLK EELRALATEI DWPTDGAPVD
IDDRALA
|
|---|
| |