| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_0195 |
|---|
| Symbol | |
|---|
| ID | 6786098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | + |
|---|
| Start bp | 217707 |
|---|
| End bp | 219029 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 642761649 |
|---|
| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_002132567 |
|---|
| Protein GI | 197120616 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGCTG CCCCGACCTC CGGACCCCTG ACCTGCCGGC GCGCCGGCCC GCTCCGCGGC
GCCATCGAGG TGCCCGGCGA CAAGTCCATC TCGCACCGGA GCCTGCTCTT CGGCGCGCTG
TCCACCGGCG AGACCCGCGT CACCGGGCTG CTCGACGCCG AGGACGTCCA CTCCACCCGC
AGGGCGGTGG AGGCGCTCGG CGCGACCGTG CGCGACGAGG GCGCCGAGGT GGTGGTGACG
CCGCCCGCGA CGCTGCGCGA GCCGGGCGAC GTCATCGACT GCGGTAACTC CGGCACGAGC
CTCCGGCTCC TCACCGGCGT GCTCTCCGGC GTGCCCGGCC TCTCGGTGCT CACCGGCGAC
GCCTCGCTGC GGCGCCGCCC GGTGCGGCGG GTGATCGACC CGCTGCGCGT GATGGGCGCG
GACCTGTCCG CCCGCGACGG CGACCGGCTG CCGCCGGTGG TGGTCCGCGG CGGCCCGCTG
CGCGGGGCGC GCCACCTGCT GCCGGTGGCG AGCGCGCAGG TGAAGAGCGC GCTCCTGCTC
GCCGGCCTGT TCGCCGACGG CGAGACCGCG GTGGTCGAGC CGGAGAAGAG CCGCGATCAC
ACCGAGCGCA TGCTGCGCGG CATGGGCGTG CCGGTGCGGG TCTCGGGGCT GGAGGTGTCG
GTCTCGGCGG CGCGGCCCGC CGGCGGCCGG GTGGACGTGC CCGGCGACAT CTCCTCGGCG
GCGTTCTTCC TGTGCGGCGC GGCGGCGCTC CCCGGCTCCG AGGTGACGGT CCGCAACCTG
GGCGTGAACG AGACGCGCAC CGGGCTGCTC GACGTGCTCC GGGCCATGGG CGCGGACGTG
CGGCTGGCGG ACCTCCGCGA GGTGGCGGGC GAGCCGCGCG CCGACGTGAC CGTGCGCGCC
GACCGCCTGG AGGGCACCGA GATCCGCGGC GCGACCATCC CGCGGCTCAT CGACGAGCTG
CCGGCGGTGA TGGTGATGGC GACGCAGGCG CGCGGCCGGA CGGTGATCCG CGACGCGAAG
GAGCTCCGGG TGAAGGAGTC CGACCGCCTC GCCGCCATGG GCGAGACGCT GGCGCGCGCC
GGCGCCCGCA TCGAGCTGTT CGAGGACGGC TGCGCCATCG ACGGCCCCAC CCCGCTCCGC
GGCGTCGAGG TCCGCACCCG GCTCGACCAC CGCATCGCCA TGGCCATGGC GGTCGCGCAG
CTGTTCTGCG GCGGCGAGCC GGTGGTGCTC GACGACGTGG CCTGCGTCGC CACCAGCTTC
CCGGGCTTCT TCCGGCTGCT CGACCAGGTG TCCGGCCCGG CGTCCGGCGG AGGCGCGCCG
TGA
|
|---|
| Protein sequence | MSAAPTSGPL TCRRAGPLRG AIEVPGDKSI SHRSLLFGAL STGETRVTGL LDAEDVHSTR
RAVEALGATV RDEGAEVVVT PPATLREPGD VIDCGNSGTS LRLLTGVLSG VPGLSVLTGD
ASLRRRPVRR VIDPLRVMGA DLSARDGDRL PPVVVRGGPL RGARHLLPVA SAQVKSALLL
AGLFADGETA VVEPEKSRDH TERMLRGMGV PVRVSGLEVS VSAARPAGGR VDVPGDISSA
AFFLCGAAAL PGSEVTVRNL GVNETRTGLL DVLRAMGADV RLADLREVAG EPRADVTVRA
DRLEGTEIRG ATIPRLIDEL PAVMVMATQA RGRTVIRDAK ELRVKESDRL AAMGETLARA
GARIELFEDG CAIDGPTPLR GVEVRTRLDH RIAMAMAVAQ LFCGGEPVVL DDVACVATSF
PGFFRLLDQV SGPASGGGAP
|
|---|
| |