Gene MADE_04089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_04089 
Symbol 
ID6775113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4399456 
End bp4400289 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content44% 
IMG OID642757540 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_002128373 
Protein GI196158884 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0056302 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCTG AATACACTAC CTCAGAATAC ATCAAGCACC ACTTGACCAA TGCCACCATG 
TGCTCAACTG ACAACGGAAT TGCTTTTAAC AAAGCCTGTT CTGATGCCGG TTTTTGGGCA
TGGCATGTTG ATACACTGGC ATGGTCAATC GGTCTTGGTC TTCTTTTCTT AATCATCTTT
AGAAGCGTTG CTTCAAAAGC GACAACAGGC GTACCTGGCA AAATGCAGGC GTTCGTTGAG
CTTGTGGTTG AGTTTGTTGA CGATAACGTA AAAAGCACAT TCCACGGTAA AAGCGCATTA
ATCGCGCCAT TAGCACTCAC TATCTTTGTG TGGGTGTTGC TGATGAACCT TATGGATTTA
GTGCCTGTTG ATTTAATTCC TTGGGTTTCT GGTCTTATCG GCCAAGCGGC TTTTGGTATG
GATCCTCACG ACGTTTACAA CAAGGCTGTT CCAACGACTG ACCTTAACCT AACGTTCGCA
CTGGCTTCAG GCGTATTCAT TCTTATTCTT TTCTACTCAA TCAAGATGAA AGGTATTGGC
GGCTTTGCTA AAGAGCTCAC TATGCAGCCT TTCGGTCACC CGATTTTTAT CCCGGTGAAC
TTCATTCTTG AAACGGTTAC TTTACTTGCG CGCCCGCTTT CACTAGCGCT GCGTTTGTTC
GGTAACTTAT ACGCCAGTGA GCTAATCTTC ATATTGATTG CTACAATTGG TTACTTCCAG
CTTCCACTGC ACTTTATGTG GGCTGTGTTC CATATTCTGG TACTTCCGCT TCAAGCGTTT
ATTTTCATGA TGTTAACCAT CGTGTACTTA AGCCTGGCGT GTGAAGACCA CTAA
 
Protein sequence
MASEYTTSEY IKHHLTNATM CSTDNGIAFN KACSDAGFWA WHVDTLAWSI GLGLLFLIIF 
RSVASKATTG VPGKMQAFVE LVVEFVDDNV KSTFHGKSAL IAPLALTIFV WVLLMNLMDL
VPVDLIPWVS GLIGQAAFGM DPHDVYNKAV PTTDLNLTFA LASGVFILIL FYSIKMKGIG
GFAKELTMQP FGHPIFIPVN FILETVTLLA RPLSLALRLF GNLYASELIF ILIATIGYFQ
LPLHFMWAVF HILVLPLQAF IFMMLTIVYL SLACEDH