Gene MADE_04082 details

Gene Information

• Locus tag: MADE_04082
• Symbol: atpC
• ID: 6776514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: -
• Start bp: 4394013
• End bp: 4394426
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642757533
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_002128366
• Protein GI: 196158877
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATGA CAGTACATTT GGACGTAGTA AGCGCGGAAA AAGCGATTTT CTCTGGACGC 
GTTGAATCGA TTCAGGTGAC AGGTAGCGAA GGTGAATTGG GTATTAACCC AGGTCACGCG 
CCACTTATCT CTGCTATTAA ACCTGGTATG GTGCGTTTGG TTAAACAGCA CGGTGAAGAA 
GAAGTTATTT ATGTTGCAGG TGGTGTACTA GAAGTACAGC CTAACAATAT TACCGTACTG 
GCTGATACCG CGGTTCGAGC TGAAGATCTT GACGAGCAGG CAGCACAAGA AGCCAAACGA 
CGTGCAGAAG AGCACATCGC CAACCCAGGC GCTGACTTTA ACTACGCAGA AGCAGCTCAC 
GAGCTTGCTG AAGCAATTGC TCAACTTCGC CTTATTCAGA AGTTACGCAA GTAA 

 

Protein sequence

MAMTVHLDVV SAEKAIFSGR VESIQVTGSE GELGINPGHA PLISAIKPGM VRLVKQHGEE 
EVIYVAGGVL EVQPNNITVL ADTAVRAEDL DEQAAQEAKR RAEEHIANPG ADFNYAEAAH 
ELAEAIAQLR LIQKLRK