| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_04048 |
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| Symbol | rph |
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| ID | 6776605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4358052 |
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| End bp | 4358765 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642757499 |
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| Product | ribonuclease PH |
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| Protein accession | YP_002128332 |
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| Protein GI | 196158843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTCCAA GCGGCAGAAC CGCCAGTCAA ATTCGCCCCG TTACTATTAC TCGCCAATAC
ACTTGTCATG CAGAAGGCTC TGTTCTTGTA GAGTTTGGTA ACACCAAGGT GTTGTGTAAT
GCGACGGTGG AAGAAGGTGT ACCACGCTTT ATGAAAGGCC AAGGCAAAGG TTGGGTGACG
GCGGAATACA GTATGCTTCC GCGCGCAACT CATACTCGCA GCGGTCGTGA AGCCGCACGC
GGTAAGCAAG GTGGCCGTAC GTTAGAAATT CAGCGTCTCA TCGCTCGTTC ACTTCGCGCT
GCACTTGACC TAAAATTACT GGGTGAAAAC ACCATCACGC TTGATTGCGA CGTTATCCAA
GCAGATGGCG GTACCCGCAC AGCCTCAATT ACCGGCGCAT GTGTTGCCTT AGTTGATGCG
CTTACATACA TGCGCAGCAA AGGTATTATT AAAACAAACC CACTTAAGCA CATGATTGCT
GCGCTATCAG TCGGTATTTA CGAAGGTACA CCCATTGCTG ACCTTGAGTA TACAGAAGAT
TCTGAAGCTG AAACCGATAT GAACATTGTA ATGACAGAGA CAGGTAAGCT TATCGAAGTG
CAAGGCACTG CTGAGGGCGA ACCTTTCTCG TTTGAAGAAC TTGATGAGCT GTTGAAAATT
GGTAAGCACG GTCTACGTGA ACTATTCGAT ATTCAAAAAG CAGCCTTGGC GTAA
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| Protein sequence | MRPSGRTASQ IRPVTITRQY TCHAEGSVLV EFGNTKVLCN ATVEEGVPRF MKGQGKGWVT
AEYSMLPRAT HTRSGREAAR GKQGGRTLEI QRLIARSLRA ALDLKLLGEN TITLDCDVIQ
ADGGTRTASI TGACVALVDA LTYMRSKGII KTNPLKHMIA ALSVGIYEGT PIADLEYTED
SEAETDMNIV MTETGKLIEV QGTAEGEPFS FEELDELLKI GKHGLRELFD IQKAALA
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