| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_04017 |
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| Symbol | |
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| ID | 6778906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4326072 |
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| End bp | 4327811 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642757468 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_002128301 |
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| Protein GI | 196158812 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0675998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTATTGC TAACTCATTT ACGCAGTTTG TACCTGGGCA CGTTCACTCA AAGACTTGGT
CAACTGGTAG CGCGCAGCGT GGAGGAAGCC GGTGGTGTTG CAAAAGAGTT CAACACAATA
GCGGTAGATG ACGGTATCGC TATGGGCCAC AGCGGGATGC TTTACAGCCT GCCCTCACGA
GAAATCATCG CTGATGCGGT GGAGTATATG GTAAATGCGC ACTGCGCCGA TGCCATTGTT
TGTATCTCTA ACTGCGACAA GATCACCCCG GGAATGTTGA TGGCATCAAT GCGCCTTAAC
GTGCCGGTAA TCTTTGTATC GGGCGGTCCG ATGGAAGCGG GGAAAACCAA GCTTTCAGAC
CAGCTTATCA AGCTAGATTT GGTTGACGCC ATGGTAGCGG CTGCTGATGA TAAAGTGAGT
GATGCTGATA CCGATGAAAT TGAGCGTTCA GCCTGCCCTA CCTGTGGTTC ATGCTCAGGG
ATGTTCACTG CTAACTCCAT GAATTGCTTA ACCGAAGCGT TAGGTTTATC ACTACCGGGC
AATGGTTCAA TGCTTGCTAC TCACGCTGAC CGTGAAGGGC TGTTCAAACA AGCAGGTAAG
CAAATAGTTG AGCTTTGCAA GCGCTACTAC GGTGATGATG ATGAAAGCGT ATTGCCCCGT
AATATTGCTA ACTTTAAAGC GTTTGAAAAC GCTATGAGCC TTGACATTGC CATGGGTGGT
TCAACCAATA CCATTCTGCA CTTGTTAGCA GCAGCGATGG AAGGTGAAGT GCCTTTCACT
ATGGATGATA TCGATAGGCT ATCTCGCAAA GTGCCTCACT TATGTAAAGT GGCGCCGTCG
ACGCCTAAAT ACCACATGGA AGACGTGCAC CGTGCCGGTG GCGTGTTAGG TATTTTGAAC
GAGCTTAACA AAGCGGGTTT GCTGAACAGC GATGTTAATC ACGTGCTTGG TAAGCCGCTT
ACTGAGGTTA TCAGCGAGTG GGATATCACT AACCCTGAAA ATAAAGACGC GATCACCTTT
TATCGCGCGG GACCTGCGGG CATTCGAACG ACTAAGGCGT TTAGCCAAGA CTGTCGCTGG
GATGAAGCCG ATGACGACCG CGAAAACGGC TGTATCCGCT CGATTGAACA CGCGTTTAGT
CAAGAAGGTG GACTCGCTGT ACTTTACGGT AATGTGGCAG AAGACGGCTG TATTGTTAAA
ACCGCAGGTG TGGATGAGTC TATTTTAAAA TTCAACGGCA CAGCGCGCAT TTATGAAAGC
CAAGACGATG CGGTAGCGGG TATTTTAGGT GACGAAGTAA AAGCAGGCGA TGTGGTATTT
ATTCGCTACG AGGGTCCGCG CGGCGGACCG GGCATGCAAG AAATGCTTTA CCCAACCTCT
TACCTAAAAT CAAAAGGCTT AGGCAAGCAC TGTGCATTAG TTACCGACGG CCGATTTAGC
GGTGGTACTA GCGGCCTGTC TATTGGTCAT TGCTCTCCTG AGGCGGCAAG TGGTGGCGGT
ATTGGCTTAG TTGAAGACGG GGACAAGATT GAAATAGATA TCCCTAACCG AAGCATCAAC
ATCGTTATTT CCGATGAAGC GCTCGCCGAA CGCCGTGCAA AAATGGAAGC GAGCGATAAG
CCTTGGAAAC CTAAAGATCG TGTACGCGAA GTTTCTACAT CACTCAAGAC CTTTGCAGCG
CTGGCAACCA GTGCCGACAA AGGTGCAGTG CGCGATGTCA GTAAGTTGGA AGACTTGTAA
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| Protein sequence | MLLLTHLRSL YLGTFTQRLG QLVARSVEEA GGVAKEFNTI AVDDGIAMGH SGMLYSLPSR
EIIADAVEYM VNAHCADAIV CISNCDKITP GMLMASMRLN VPVIFVSGGP MEAGKTKLSD
QLIKLDLVDA MVAAADDKVS DADTDEIERS ACPTCGSCSG MFTANSMNCL TEALGLSLPG
NGSMLATHAD REGLFKQAGK QIVELCKRYY GDDDESVLPR NIANFKAFEN AMSLDIAMGG
STNTILHLLA AAMEGEVPFT MDDIDRLSRK VPHLCKVAPS TPKYHMEDVH RAGGVLGILN
ELNKAGLLNS DVNHVLGKPL TEVISEWDIT NPENKDAITF YRAGPAGIRT TKAFSQDCRW
DEADDDRENG CIRSIEHAFS QEGGLAVLYG NVAEDGCIVK TAGVDESILK FNGTARIYES
QDDAVAGILG DEVKAGDVVF IRYEGPRGGP GMQEMLYPTS YLKSKGLGKH CALVTDGRFS
GGTSGLSIGH CSPEAASGGG IGLVEDGDKI EIDIPNRSIN IVISDEALAE RRAKMEASDK
PWKPKDRVRE VSTSLKTFAA LATSADKGAV RDVSKLEDL
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