| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_04004 |
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| Symbol | |
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| ID | 6778822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4311606 |
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| End bp | 4312250 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642757455 |
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| Product | uncharacterized secreted protein of SCO1/SenC/PrrC family |
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| Protein accession | YP_002128288 |
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| Protein GI | 196158799 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCAAC GAATCACTGT CGGCCTTGTT GCGTTTTTAG CACTTTGTGC TGGCATAGTC
GGGGCGCTTT ATATTGCGCC CCCGAGTGTT GAAGGCGAGC CTGACTATTT TCAAACCTAC
CCAGAACCAC GTGCTATATC GCCTTTTTCC TTGGTATCGC ATAAGGGCGA ACGCTTTGAT
ACGTCGTCTT TAAAAGGCCA GTGGAGCCTT GTGTTTGTGG GCTATACCTT TTGCCCCGAC
ATTTGCCCTA CTACCATGGC TGAGCTCAAT AATATTTACC CAGAACTTCA AGCCCTAAAT
AGCGTCGAAC CAATTCGCAT TGTTTTTGTA TCTGTGGACC CAAAACGCGA CTCAGTTGAA
AGACTGGCAG AGTATGTGAG CTATTTTAAT GAAGAGTTCA TTGCCCTTAC CGGCGAGCAT
AAAACGCTTT TTCCCTTCGT ACGCAACTTG GGAATGATGT ATGCTATTGC AGAAAGTACC
GACAACCCCA ATTATTTAGT TGATCACAGT GCGTCCGTTG TACTTATCGA CCCTGAAGCT
AGGGTGATAG GAAGATTTAA ACCAAAAAGA GAGCCAGGAA AGCTATCGAT AAGTGATTCC
CAGCAAATAT TGGCAGACAT GCCAGTAATT ATCTCAAAGC AGTAG
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| Protein sequence | MNQRITVGLV AFLALCAGIV GALYIAPPSV EGEPDYFQTY PEPRAISPFS LVSHKGERFD
TSSLKGQWSL VFVGYTFCPD ICPTTMAELN NIYPELQALN SVEPIRIVFV SVDPKRDSVE
RLAEYVSYFN EEFIALTGEH KTLFPFVRNL GMMYAIAEST DNPNYLVDHS ASVVLIDPEA
RVIGRFKPKR EPGKLSISDS QQILADMPVI ISKQ
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