Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03998 |
Symbol | |
ID | 6777447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 4307061 |
End bp | 4307759 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642757449 |
Product | aspartate racemase |
Protein accession | YP_002128282 |
Protein GI | 196158793 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAA AACTTGGTTT GTTAGGCGGA ATGAGTTGGG AGTCTACGGT CAGTTATTAT CAAGCAATAA ACCGAGGGGT GAATGCCCGC CTTGGCGGCT TACACAGCGC TCAACTCGTT TTGAGCAGCG TTGATTTTGC GCAGATAGAA CAGCTTCAAC ATAGAGGAGA CTGGAGTAAA ACCGCAGATA TTCTCACTCA AGAAGCCAGA AACCTTGAGC TAGCTGGCGC AAAAGCCTTG GTTATCTGTA CCAATACCAT GCACAAAGTA GCCGACACCA TTGAGCAAAA TATTTCAGTC CCGCTTATTC ATATCGCCGA TGCTACAGGT AACGAGCTTC AACAGCATAG CGTTAAAAAA GTCGGGCTAC TCGGCACACG CTTTACCATG GAGCAACCCT TTTATAGGTC GCGCATAGAA AATAATTTTA ACATTGATGT TATTACGCCC AATGCACGAC AGCGAGATAT TGTGCATAAG ATAATTTATG AACAATTATG CAAGGGCGTG ATTTGTGTTG ACTCCCGTAA CGCGTATATT GAGATTATTA ACGCACTTGC AGGCAAAGGT GCTGAAGGCA TTATTTTAGG CTGTACGGAA ATCGCATTAT TGATACAGCA GCAACACACC CAAGTTCGGT TATTCGATAC CACTGCTATT CACGCATCTG CAGCCGTCGA CATTGCATTA AGTGATTGA
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Protein sequence | MMKKLGLLGG MSWESTVSYY QAINRGVNAR LGGLHSAQLV LSSVDFAQIE QLQHRGDWSK TADILTQEAR NLELAGAKAL VICTNTMHKV ADTIEQNISV PLIHIADATG NELQQHSVKK VGLLGTRFTM EQPFYRSRIE NNFNIDVITP NARQRDIVHK IIYEQLCKGV ICVDSRNAYI EIINALAGKG AEGIILGCTE IALLIQQQHT QVRLFDTTAI HASAAVDIAL SD
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