Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03963 |
Symbol | |
ID | 6777806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 4270840 |
End bp | 4271916 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642757414 |
Product | putative general secretion pathway protein |
Protein accession | YP_002128247 |
Protein GI | 196158758 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3156] Type II secretory pathway, component PulK |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATAA CAAACAATAA CACGCCGCTA AAAAAGTACA GACAAGCGAG CTCAGCTATT GCAAAGCCGC AACTTGGTAA TGCACCGGGC AAGCAGCAGG GTGTGGCGCT AATGATCGTT TTGATGATTG TGGCGCTAGT TGCCGTGCTG GCTACCGAAA TGGGCACGCG GCTGCAGCTT CAAGTTCAGC GCACCATGAA CTTAAAAGAC AATAATCAAG CCTACTGGTA TGCCATGGGA GCAGAAGCGT TTGCAAGAAA GTCCATCCAA TCTCTTGTTG AAGAAAGCCC TGAGGTCATT TCTATTGATC AACCTTGGGC GCAGGAATTT AGCTATCCGT TAGAAAACGG CGGCCTAACG GCAAACTTAG AAGACCTACA GGCCTGTTTT AATCTTAACG CTATCACATC GGGTAGCGCT TCGAATAACG CAAATAGCGC CTCGAGCAAT ACCACTGAGG CTATGGAAGC CTTTCACACT ATGCTGCTAT CACTTAGTGT TGATGGACTA GATAACTACA CCGCTGACAC GCTACGCGAC AGTCTTGCCG ACTGGGTGGA TGACGACGAC AACATGCGAC CGTATGGGGC AGAAGACAGC GAGTATGAAT CGAGAGAATT TCCATACCTT GCAGCTAACG GACCACTGGC ATCAAAAAGT GAATTGCGTA TTATTAACGG AGTGTCACCA GAATGGCTAA ACGCATTACT GCCTTTAGTG TGTGTGATCC CAGATTACAG TGAGTTAAAA ATTAACGTTA ACACGTTAGA AGAAGAAGAA GATGCACCGC TGCTGGCAGG GTTAACAGGG CTTGATATTC AACAAGCTGC AAGTTTGCTA AGCAGTCGCC CACAAAATGG GTGGGACGAT ACCAACGCGT TTTTAAGCGA ACCGTCTATT CAGGCACTGA ATTTAACAAG CTCTCGACAA GACTGGTTTT CAGTTAAAAC TGAATATTTT ATGTTGCATA CAAAAACACA ATACAACAAA GCAACCTTTA AGCTTTCCAC CGTGTTTCAC GCTAGCGCCG ATAGCGGCGT TAATGTTGTG AATCGCGAGT TTGGGGGAAC CTATTAA
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Protein sequence | MSITNNNTPL KKYRQASSAI AKPQLGNAPG KQQGVALMIV LMIVALVAVL ATEMGTRLQL QVQRTMNLKD NNQAYWYAMG AEAFARKSIQ SLVEESPEVI SIDQPWAQEF SYPLENGGLT ANLEDLQACF NLNAITSGSA SNNANSASSN TTEAMEAFHT MLLSLSVDGL DNYTADTLRD SLADWVDDDD NMRPYGAEDS EYESREFPYL AANGPLASKS ELRIINGVSP EWLNALLPLV CVIPDYSELK INVNTLEEEE DAPLLAGLTG LDIQQAASLL SSRPQNGWDD TNAFLSEPSI QALNLTSSRQ DWFSVKTEYF MLHTKTQYNK ATFKLSTVFH ASADSGVNVV NREFGGTY
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