| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03957 |
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| Symbol | |
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| ID | 6777880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 4265884 |
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| End bp | 4267443 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642757408 |
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| Product | Type II secretory pathway, ATPase PulE-like protein |
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| Protein accession | YP_002128241 |
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| Protein GI | 196158752 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGATG AACAACTTAC TCAAGCACTA GAGGCCCAAG AAGAAGCCCT AGAAGCCATG
GGTGATGACG CCGGCTTACC TGAAGCAGAG GCCGGCCCTA AGCAGCTCTC TTTTAGCTTT
GCTAAGCGCA ACCAGGTGCT GCTTGAAACC AACGAAACGC CAGCGGTGCT GTATTTTACA
GAAAACACGC CGTTTGACGT GTTTGCAGAA GTGCGTCGCT TCTACGGCGA GCCTTTTGTA
CCGAAAACTA TACCCGCTGA CGAATTTGAA AACTTACTGA CTAGCGCGTT TCAGCGCGAT
AGTTCTGCAG CGAAGCAGTT AATGGAAGAC TTAGGCAACG AAAGCGATTT ATTCGCCCTT
GCAGAAGACT TACCCGACAC TGAAGACCTG CTAGATAGCG AAGACGACGC CCCTATTATC
AAGCTTATTA ACGCCATGCT AGGTGAAGCA ATTAAAGAAG GCGCGTCAGA TATTCATATC
GAAACGTTTG AAAACCAGCT TGTGGTTCGC TTTCGGGTAG ACGGTGTGTT GCGGGAAATT
TTGCGCCCCA ATCGCAAGCT TAGCTCTATG CTGGTATCGC GTATAAAAGT AATGGCCAAG
CTAGATATTG CAGAAAAACG CGTCCCCCAG GATGGCCGTA TTACACTGCG TATTGCCGGG
CGAGCGGTAG ACGTTCGTGT TTCGACGATG CCTTCTAGCC ACGGCGAACG TGTGGTACTG
CGTCTTTTAG ACAAAAATAA CGCCCGCTTG AATCTAGAAG ATTTGGGCAT GACGCTGCAA
AACCGTAACC ATTTCTCGAC GTTAATACGA AAACCACACG GTATTATTTT GGTTACTGGC
CCTACCGGTT CCGGTAAAAG TACCACCTTG TACGCAGGGC TTACCGAGAT AAACTCCCGC
GATAGGAATA TTTTAACGGT AGAAGATCCT ATCGAATTCG ACCTGCCAGG CATTGGACAA
ACGCAGGTTA ACCCCCGTGT AGACATGACC TTTGCACGAG GCCTTCGCGC AATTTTGCGT
CAAGACCCCG ATGTTGTCAT GGTCGGTGAG ATTCGTGATA TCGAGACTGC GCAAATTGCC
GTTCAGGCCA GTTTAACCGG TCACTTAGTG CTTTCTACCC TGCATACTAA CACCGCCGCT
GGCGCCATTA CTCGCTTAGA AGACATGGGC ATAGAGCCTT TCCTTTTATC TTCCAGTTTA
TTGGCAGTAC TGTCACAGCG ACTCGTTCGT ACGCTATGCC CAGACTGTAA AAAGCCGCAT
ACGCCGGATG CGTCTGAACT TGAAATATTA GGCCAAGGGG CCACCAGCAG CACTACAATT
TACAAACCTC ACGGCTGTGC AGCGTGTAAC CAAACCGGGT ATCGTGGCCG TACGGGTATT
CACGAATTGC TTTTAGTTGA TGAAAAAGTG CGTGAAATGA TGCACGAAGG TGTGGGCGAA
CAAGCCATTG AGCGCTACAT CAGAACCTCT ACCCCAAGCA TCCGTGAAGA TGGCTGTAGT
AAAGTGCTTA TCGGTGAAAC CTCTCTTGAA GAAGTGCTTC GAGTAACGAG GGAAGACTAG
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| Protein sequence | MADEQLTQAL EAQEEALEAM GDDAGLPEAE AGPKQLSFSF AKRNQVLLET NETPAVLYFT
ENTPFDVFAE VRRFYGEPFV PKTIPADEFE NLLTSAFQRD SSAAKQLMED LGNESDLFAL
AEDLPDTEDL LDSEDDAPII KLINAMLGEA IKEGASDIHI ETFENQLVVR FRVDGVLREI
LRPNRKLSSM LVSRIKVMAK LDIAEKRVPQ DGRITLRIAG RAVDVRVSTM PSSHGERVVL
RLLDKNNARL NLEDLGMTLQ NRNHFSTLIR KPHGIILVTG PTGSGKSTTL YAGLTEINSR
DRNILTVEDP IEFDLPGIGQ TQVNPRVDMT FARGLRAILR QDPDVVMVGE IRDIETAQIA
VQASLTGHLV LSTLHTNTAA GAITRLEDMG IEPFLLSSSL LAVLSQRLVR TLCPDCKKPH
TPDASELEIL GQGATSSTTI YKPHGCAACN QTGYRGRTGI HELLLVDEKV REMMHEGVGE
QAIERYIRTS TPSIREDGCS KVLIGETSLE EVLRVTRED
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