| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03947 |
|---|
| Symbol | ompR |
|---|
| ID | 6777964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 4253129 |
|---|
| End bp | 4253851 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642757398 |
|---|
| Product | osmolarity response regulator |
|---|
| Protein accession | YP_002128231 |
|---|
| Protein GI | 196158742 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCAGG AAACCTCAAA AATTCTCGTT GTTGATGATG ATATGCGCTT ACGTAGCCTG
TTAGAGCGTT ATCTGCTAGA GCAAGGTTAT CAAGTGCGCA GCGCGGCAAA CGCTGAGCAA
ATGGACAGAT TGCTAGAACG TGAGAATTTT CATCTTATGG TTTTAGACCT TATGCTGCCC
GGTGAAGATG GCCTGTCTAT TTGTCGGCGC TTGCGCCAGC AAGAAAACGA CATGCCTATT
ATTATGCTTA CCGCCAAGGG CGATGAAGTA GACCGCATTA TCGGCCTTGA AATGGGCGCA
GACGATTACT TACCTAAGCC CTTTAACCCT CGTGAACTGC TGGCGCGCGC TAAAGCGGTG
TTGCGCAGAC GCAGCAGCGA AGCGCCCGGC GCGCCTTCAA AAGATGTTCA AATAGTCGAA
TTCGGTGACT ATAAGCTTAA TTTAGCCACC CGCGAAATGA CCGCTGGCGA TAAACCGCTA
ACCCTGACTA GCGGCGAGTT TGCCGTATTA AAATCGCTGG TGACTCACCC CCGCGAGCCG
CTTTCGCGAG ATAAGCTAAT GAACCTAGCT AGAGGCCGTG ACTACAGTGC ATTAGAGCGA
AGCATCGACG TTCAGGTTTC TCGTTTGCGT AGAATGCTAG AAGAAGACCC TGCTAACCCA
CGCTACATAC AAACCGTATG GGGCTTAGGC TATGTCTTCG TTCCAGACGG TGAGCAAGTA
TAG
|
|---|
| Protein sequence | MGQETSKILV VDDDMRLRSL LERYLLEQGY QVRSAANAEQ MDRLLERENF HLMVLDLMLP
GEDGLSICRR LRQQENDMPI IMLTAKGDEV DRIIGLEMGA DDYLPKPFNP RELLARAKAV
LRRRSSEAPG APSKDVQIVE FGDYKLNLAT REMTAGDKPL TLTSGEFAVL KSLVTHPREP
LSRDKLMNLA RGRDYSALER SIDVQVSRLR RMLEEDPANP RYIQTVWGLG YVFVPDGEQV
|
|---|
| |