Gene MADE_03945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03945 
Symbol 
ID6778070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4250753 
End bp4251658 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content47% 
IMG OID642757396 
Productphosphoribulokinase 
Protein accessionYP_002128229 
Protein GI196158740 
COG category[C] Energy production and conversion 
COG ID[COG3954] Phosphoribulokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTCA AACACCCTAT TATTGCTATA ACAGGTTCTT CTGGCGCGGG TACTACCACC 
ACGACCAATG CTATTCGCCA TATATTCAGG AACTTAAATG TTAATGCTGC AGTAGTCGGC
GGTGATAGCT TCCACCGTTT TACCCGTCCA GAAATGGAAG TGGAAATTCG TAAGGCCCAA
GAGCAAGGCA GGCATATCAG CTACTTTGGC CCCAAAGCCA ACGACTTCGA GTTACTCGAG
ACGCTGTTTA GAGAATACGG AAGTTCAGGT ACTGGCCAGT TCAGACAATA CCTACACACC
TTCGATGAAG CTGTACCTTT CAACCAAATG CCAGGTACCT TTACACCGTG GCAAGATTTG
CCTAATAACA CCGATTTACT GTTTTATGAA GGGTTACACG GCGGCGTTAA AACAGAAGAA
AATGACGTTG CAAAACACGT TGATTTACTG GTAGGCATGG TACCCATTGT AAATTTAGAG
TGGATCCAAA AAATTGTGCG CGATACCACT GACCGAGGTC ATTCCCGAGA AGCGGTAATG
AGTAGTATTG TGCGAGGGCT TGATGACTAC TTCCACTACA TCACGCCGCA ATTTTCGCGC
ACTCATGTTA ACTTTCAGCG CGTGCCTACA GTCGATACCT CCAACCCGTT CAGCGCCCGG
GAAATTCCAA CCCAAGACGA AAGCTTTGTT GTAGTGCGTT TCAGACGGGA AATGAAAACC
GTCGATTACC CCTACTTGCT TCAAATGATT GATGGGGCTT TCATGTCTAG GATCAATACC
CTTGTTGTGC CCGGCGGAAA AATGGGGCTA GCCATGGAGC TTATCTTAAC CCCGCTGCTT
GAAGACATTT TGAATAAAAA ACGTCGAGCC GGTCATCAGA TGGATTGGCT AAATAGCGAC
GGCTAA
 
Protein sequence
MSVKHPIIAI TGSSGAGTTT TTNAIRHIFR NLNVNAAVVG GDSFHRFTRP EMEVEIRKAQ 
EQGRHISYFG PKANDFELLE TLFREYGSSG TGQFRQYLHT FDEAVPFNQM PGTFTPWQDL
PNNTDLLFYE GLHGGVKTEE NDVAKHVDLL VGMVPIVNLE WIQKIVRDTT DRGHSREAVM
SSIVRGLDDY FHYITPQFSR THVNFQRVPT VDTSNPFSAR EIPTQDESFV VVRFRREMKT
VDYPYLLQMI DGAFMSRINT LVVPGGKMGL AMELILTPLL EDILNKKRRA GHQMDWLNSD
G