Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03924 |
Symbol | |
ID | 6778584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 4229010 |
End bp | 4229450 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642757375 |
Product | 3-dehydroquinate dehydratase (3-dehydroquinase) (Type II DHQase) |
Protein accession | YP_002128208 |
Protein GI | 196158719 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.252405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTT TGTTATTAAA CGGCCCTAAC CTAAACATGT TAGGCCAAAG AGAACCCGAC AAATACGGCA CACAGACCCT GCAAGACATC GTGGATGATT TGCAGGCGCA AGCTGAGTCG AGCAACGTGA CGTTAACGCA TTTTCAGTCT AACGCGGAAC ACGCGCTGAT CGAACGTGTG CACGCCGCTA TGGGTTCTGT CGACGCCATT ATCATTAATC CTGCTGCCTT CACGCACACC AGTGTCGCCC TTCGCGACGC GTTGTTAAGT GTCAATATCC CGTTTATTGA AGTGCATTTG TCGAACGTTC ACGCCCGTGA GCCGTTTCGT CACCATTCCT ATTTTTCTGA TGTTGCAGCC GGCGTCATTG TTGGCCTTGG TGCCATGGGT TACTCGCTCG CGCTAACTGC AGCAATCAAT TTAACGAAAT CGCAAAAATA A
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Protein sequence | MNILLLNGPN LNMLGQREPD KYGTQTLQDI VDDLQAQAES SNVTLTHFQS NAEHALIERV HAAMGSVDAI IINPAAFTHT SVALRDALLS VNIPFIEVHL SNVHAREPFR HHSYFSDVAA GVIVGLGAMG YSLALTAAIN LTKSQK
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