Gene MADE_03924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03924 
Symbol 
ID6778584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4229010 
End bp4229450 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content49% 
IMG OID642757375 
Product3-dehydroquinate dehydratase (3-dehydroquinase) (Type II DHQase) 
Protein accessionYP_002128208 
Protein GI196158719 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.252405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTT TGTTATTAAA CGGCCCTAAC CTAAACATGT TAGGCCAAAG AGAACCCGAC 
AAATACGGCA CACAGACCCT GCAAGACATC GTGGATGATT TGCAGGCGCA AGCTGAGTCG
AGCAACGTGA CGTTAACGCA TTTTCAGTCT AACGCGGAAC ACGCGCTGAT CGAACGTGTG
CACGCCGCTA TGGGTTCTGT CGACGCCATT ATCATTAATC CTGCTGCCTT CACGCACACC
AGTGTCGCCC TTCGCGACGC GTTGTTAAGT GTCAATATCC CGTTTATTGA AGTGCATTTG
TCGAACGTTC ACGCCCGTGA GCCGTTTCGT CACCATTCCT ATTTTTCTGA TGTTGCAGCC
GGCGTCATTG TTGGCCTTGG TGCCATGGGT TACTCGCTCG CGCTAACTGC AGCAATCAAT
TTAACGAAAT CGCAAAAATA A
 
Protein sequence
MNILLLNGPN LNMLGQREPD KYGTQTLQDI VDDLQAQAES SNVTLTHFQS NAEHALIERV 
HAAMGSVDAI IINPAAFTHT SVALRDALLS VNIPFIEVHL SNVHAREPFR HHSYFSDVAA
GVIVGLGAMG YSLALTAAIN LTKSQK