| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03894 |
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| Symbol | |
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| ID | 6777369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4194252 |
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| End bp | 4196171 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642757345 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_002128178 |
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| Protein GI | 196158689 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0027527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAT TGTCAGATTG GAGCATCGAA GAAGCGGAGC GCGTCTATGG CGTATCTCAA
TGGGGTGGCG GCTATTTTCA AATTGGTGAA AATGGCAACG TGCATATTAC CCCTGTGCCT
GAAGATCCTA GCATTCGAAT CGACTTTAAT TCGGTAATAG AAGATATTCG CAAAGAAGGC
GTGCAGTTTC CTGTTGTTGT GCGTTTTCAC GATATTCTTC GCTCGCAAGT TGCAGGCTTA
AACAAAGCAT TTCGACACGC CATAGAAGAA GCCGAGTATC AAGGTCAGTA CCAAGGTGTT
TACCCGGTTA AAGTTAACCA AATGCGTGAA GTGGTTGAAG AAATTGTTGA TGCAGGCAAA
CCCTATAATT ATGGCTTAGA AGCAGGGTCT AAGGCAGAAC TGCTTACTGT TCTGGCTATG
AATACAAACG AAGAATCGCT GACCATTTTA AACGGTTACA AAGACGACGA AGTTATGCGT
TTAGCGCTTC TTGGTAGAAA GCTCGGTCGA CGGGTTGTCG TTGTTGTTGA GAAATTTACC
GAGCTTCTAT TGCTTGTAAA AACCGCTAAA GAATTAGGCA TTGAGCCTAT CATTGGCGTT
CGCTCAAAAA TGACCGTAAA AGGTCGTGGT AAGTGGGAAA GTTCTGGCGG CGAACGTGCG
AAATTTGGTT TAACGATCAC TGAAATTATT AACGCGGCGC GCTATTTAGA AGAGCAGGGC
ATGGCCCACT GCTTGAAACT ATTGCATTTC CATATTGGCA GTCAGCTAAC CGATATACGA
GCGGTAAAAG AAGCCGTTAC AGAGGGCGCG CGAATCTACG CCGACCTTCA TAAGATGGGC
TTTGCCCTAG ACTATGTTGA CGTGGGCGGT GGCTTAGGTA TCGATTACGA TGGCAGTAAC
TCAACGAATG AGTCGTCGCG TAATTACAGC ATGCAAGAAT ACGTTGCTGA TGTTGTATAT
GGCATGAAAG AAATGTGCGA TTTAGAAGGT GTGCCGCACC CTCACCTTGT AAGTGAGAGT
GGACGCGCTA TTACCGCCCA CCATAGCTGT GTTATTACCG AAATTGTTGG AGAGATTAAA
ACCAACGCGG CACAGATGGA TACCTCAGCA ACAGAGGGTG AACATTTCTT TTTGAAAAAT
ATGCGTGAGC TTGCCGACAC CTTTGACGAA CAAACCAATA TGCACGAAGT GTATAACGAT
GCGTCTCAAT ACAAAGAGCA GGCATTAGAT GCCTTTAAAC TGCGCGTTTT ACCCTTAGAA
GAGTTGGGCA AAATAGAAAC CCTTTATTGG GATATTATGG GCCGCTTACA GAAGTGGTAT
CGCAACGAAG AATACGTACC GGAAGAGTTA CAAGAATTGG ATTACAGTTT GTCATCACAA
TACCTTTGTA ACTTCTCTGT TTTCCAGTCG GCTGCCGATA CGTGGGCAAT CGACCAGCTT
CTGCCGGTAG TGCCGCTTAT TCGTATGAAC GAAGAGCCCA CGGTGAACTG TTCGTTGGTT
GATATTACGT GCGACAGCGA CGGTAAAATT GACCAGTTCA CTATTGGGCG CGAGATCACC
GACGTATTGC CCATGCACCC GCTTAAGAAA GACGAGCCTT ACTATATTGG GCTATTCTTA
ACAGGGGCAT ACCAAGACGT GATGGGCGAT ATGCACAACT TGTTTGGTCG CCTAAACGAA
GTGCACATTT ACAGCTACGA TGACGACCCT GAAGACTTCT ATATTGAAGA GGTAGTGAAA
GGCTCTTCGG TAGAAGATGT GCTTAATGTT ATGCAATATA ACCCTCGTGC GATGGCATCA
GATGTAAAAC GCATGATTGA TAGACAAGTA TGGGACGGAA AGTTGAACCC TCGTGAAGGT
GTTCGCTGGA CCGATTTCTA TGAAAACTGT TTAGCCGGTT ACACCTACTT AAAACAGTAA
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| Protein sequence | MNKLSDWSIE EAERVYGVSQ WGGGYFQIGE NGNVHITPVP EDPSIRIDFN SVIEDIRKEG
VQFPVVVRFH DILRSQVAGL NKAFRHAIEE AEYQGQYQGV YPVKVNQMRE VVEEIVDAGK
PYNYGLEAGS KAELLTVLAM NTNEESLTIL NGYKDDEVMR LALLGRKLGR RVVVVVEKFT
ELLLLVKTAK ELGIEPIIGV RSKMTVKGRG KWESSGGERA KFGLTITEII NAARYLEEQG
MAHCLKLLHF HIGSQLTDIR AVKEAVTEGA RIYADLHKMG FALDYVDVGG GLGIDYDGSN
STNESSRNYS MQEYVADVVY GMKEMCDLEG VPHPHLVSES GRAITAHHSC VITEIVGEIK
TNAAQMDTSA TEGEHFFLKN MRELADTFDE QTNMHEVYND ASQYKEQALD AFKLRVLPLE
ELGKIETLYW DIMGRLQKWY RNEEYVPEEL QELDYSLSSQ YLCNFSVFQS AADTWAIDQL
LPVVPLIRMN EEPTVNCSLV DITCDSDGKI DQFTIGREIT DVLPMHPLKK DEPYYIGLFL
TGAYQDVMGD MHNLFGRLNE VHIYSYDDDP EDFYIEEVVK GSSVEDVLNV MQYNPRAMAS
DVKRMIDRQV WDGKLNPREG VRWTDFYENC LAGYTYLKQ
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