Gene MADE_03874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03874 
Symbol 
ID6776541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4171904 
End bp4173106 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content46% 
IMG OID642757325 
ProductHeme/copper membrane protein 
Protein accessionYP_002128158 
Protein GI196158669 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3213] Uncharacterized protein involved in response to NO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAACA TCGTGGATAA TCAACAAGAG CAAAAAATTA CACCATTGCT ACGTTTAGGG 
TTTCGGCCGT TTTTCTTGTT CGGTAGTCTG TTTGCAACCT TATCCATGGT GTTATGGCTG
CTGACTTTAA GGGGCGTTGT TTCAGTTGAG CCACTTAATG GCATGCTTTG GTGGCATAGT
CATGAAATGT TGTTTGGCTT CACGGCAGCG ATAATCGCTG GTTTTTTACT CACCGCTGTT
CAAACCTGGA CGAACATTCC AAGTATCAAA GGAGGGCAAC TTCTGTTTTT GGTCTGCCTG
TGGGGACTGG CACGGCTGTT GATTTTGTTT GGCACAGCGT CAATGTTGCC ATTGGCGATG
ATTACCGATT TGGTATTTTT ACCGTTAACG GCATTTTTTG TTGGCCAACG GGTTATGAGG
ATTCGCCAGT ATAGAAACCT GATTTTTATT CCTGTGTTAG TACTAATGTC GGTTATGAAC
CTTTTTACCT ATCTACCCAG CTTAGGCTTT GATTCAGCCT GGCAGGCACG CGGTACACAC
GGTATGACGT TGTTAGTCAC CTTCCTTGTG GCTTTTTTAG GCGGTAGAGT TATTCCGATG
TTTACCGCAA ACGGCACAAA AACGACCAAA GTGTTACCTA TTAAGTGGTT AGAAATATCA
GCCTTGGCTA GCCTCGTAGT TGTGTTGGTT TTACTGCTGC TCAAAGATGT GGGTGATTTT
AACATGTTGA CGAGCATTGC ATGCCTGACA GCCGCCTTGC TTCACGCCAT ACGCCAGTGG
CGGTGGCGCA TCTGGGTCAC GCTCACTGTG CCACTCGTGT GGTCTTTGCA TTTTACTATG
CTGTTCATTC CAATAGGGCT TGTATTGCTA AGCCTGCATT TTTTTGGTGC TAATATTACT
TTAAGTACCG CAATCCACAG CTTAACCGTT GGTGCTATCG GCGGAATGAT TTTAGCCATG
ATGTCTCGCG TATCACTTGG GCATACCGGC AGGATGTTAC AAGTTGGAAA GCTAATGAGC
GTCGCTTATT TTGCTGTTGT GATCAGTGCG ATAGTGCGGT CTATTGCATT AGCGATATGG
CCGCAGTGGA CAATTCAATT TTGGGTATTG GCGGGTTGCC TGTGGTGTTT AGCATTCGGT
TTGTTTTTCT TTAAATACTT GCCTGTACTG TCGGCACCTA GGGTCGACGG CAGGCCAGGG
TAA
 
Protein sequence
MLNIVDNQQE QKITPLLRLG FRPFFLFGSL FATLSMVLWL LTLRGVVSVE PLNGMLWWHS 
HEMLFGFTAA IIAGFLLTAV QTWTNIPSIK GGQLLFLVCL WGLARLLILF GTASMLPLAM
ITDLVFLPLT AFFVGQRVMR IRQYRNLIFI PVLVLMSVMN LFTYLPSLGF DSAWQARGTH
GMTLLVTFLV AFLGGRVIPM FTANGTKTTK VLPIKWLEIS ALASLVVVLV LLLLKDVGDF
NMLTSIACLT AALLHAIRQW RWRIWVTLTV PLVWSLHFTM LFIPIGLVLL SLHFFGANIT
LSTAIHSLTV GAIGGMILAM MSRVSLGHTG RMLQVGKLMS VAYFAVVISA IVRSIALAIW
PQWTIQFWVL AGCLWCLAFG LFFFKYLPVL SAPRVDGRPG