Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03830 |
Symbol | |
ID | 6776378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 4127457 |
End bp | 4129469 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642757281 |
Product | putative TonB-dependent receptor protein |
Protein accession | YP_002128114 |
Protein GI | 196158625 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCTG CACAGGAAGC CAATGAAATA GAAAGAATAG AGACCATATC TTCACGAATT CAAGGCCAGA TAACAGCAAC GGGCTATGCG GTATCATCTA TTTCAGAAGA GACGCTCTCA ATGCTTTCTT TTCAGCATAT TCAAGAGTCG CTTAATTACA TTGCGGGCGC CGGTGTTCAA AGAGGAAATG GACAGGAGTA TTTGCCTGCG TTGCGCTCAC CGGTTCTCAC AGGTGCAGGG GCATGCGGTG GCATACTGGC CGCTGAAGAC GGCATACCAT TGCGCGCTGC CGGCTTTTGC AACATCAATG AGCTGTTTGA AGCGCATGGC GAGGTTGCAG AGCGTATTGA TGTAGTTAAA GGCCCTGCGT CTGCATTGTA TGGCTCTAAT GCTATCCACG GGGTTATCAA CGTAATTACA CCAGACACTA CGCAAGGCAC TGGTCAGCTC GCTTTGGATT ACGGCTCATA TGGTTTTCAC CGCGCTAAAC TTCAACAAGG CAAAGACTTT GGCAGCAGTG GCGTGGGTAT TGCTGCAAGC TTAACCCGTG ACACTGGCTA TCGAAATGAC GAAGGTGTCG ACCAAGAAAA AGTCTCGTTG CGCCACCGTA TTGAGTGGGA CAGCACGGTG ATAACCAGCG GCCTAACCTA TACACACTTA GACCAAGAAA CGGCAGGTTA TATAGAAGGT TTTGAAAGCT ATAAAAGTAC CGAGCTTGCC AGAAGTAACC CAAACCCCGA AGCGTTTCGC AATGCAAAAA GCTTAAGGAT ATGGAGTAAG TTCAATACGT CCTTTGATGG TGGACATGGA TTATCAATTA CCCCTTACCT ACGCAATCAA GATATGCGTT TTCGCATGCA CTTTCTACCT GGCAAACCCC TTGAAGAAAA CGCACAGAAG GGCGTAGGGG TGCTGTCGCA GTTTAATTAT ATCGTTAACG ATTACGTTTC CTTAGATTTA GGCATAGATG CCGAATACAC CGAAGGCGAG TTAGTGCAGT CTCAACAAGG CGCTACCGAA GGTTCTGCTT TTTTAGTTGA AACCATACCG TCTGGTAAGC ACTACGATTA CGATGTAGAT GCAGCGTTAA TTGCGCCGTT TTTCGCTTTA AACTGGCAAC ACGAAAAATG GGATGTTTCT TTTGGCGGGC GCTTTGAATC GATGCAATAC GACTACACCA ACAATATGAA CGTAGGGCGT GTGCGAGAAG ATGGTACCCA ATGTGGTTTT GGCGGTTGTC GTTATTCTCG CCCAGCCGAT AGCAGTAACG ACTTTGACAG TTTTAGCCCT AAGCTTTCTT TGCGCTATCA GCTGAGCGGG TCTACGCAAT TATTTGGCGG CCTTGCGCGG GGTTACCGTG CGCCACAAGC CACTGAATTG TACCGTTTAC AGCGGGCTCA AGAAGTAACA GATTTAGATT CAGTCACCGC AGATAATATC GAAGTTGGTA TTACAGGTAC CACTGACCGG GGCAGCTATA CCCTTTCTTT CTATAGCCTT GAAAAAGATA ACGTGATTTA TAGAGACAGC AATTTTTTTA ACGTGAGCAA TGGAGAGACG TGGCATAGAG GCGTAGAGCT TTCGTTTAAT CAAAAAATTA GCGATGTTTT ACGCGTAGAC TTCGCCGGTA CTTACGCAAG GCATACCTAT GAGCACAGCC AAATCACTGG TGAGCTAGAT ATTAAAGGCA ACGATATGGA TACCGCGCCC AAGGTGCAGT TAAACACCCG CTTAAACTAT GACGTCACAA GGAATATTCA GGCGCAAATA GAATGGCAGC ATGTGGCAAG CTACTATACT GACGCTGAAA ATTTAAACGA ATATGATGGC CATGACTTAG TGCATGCGCG AGTGCGTTTT AACGTTAATA ATGACATTAC GCTTCACGCG CGTATCAACA ACGTATTCGA TACCAAGTAC GCTGAGCGTG CTGACTTTAC TAGTTTTACA GGCCCTCGTT ACTTCCCTGG TCGCCCTCGA AACTTCATGC TAAGCGCTAC TTTCGCACTG TAA
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Protein sequence | MAAAQEANEI ERIETISSRI QGQITATGYA VSSISEETLS MLSFQHIQES LNYIAGAGVQ RGNGQEYLPA LRSPVLTGAG ACGGILAAED GIPLRAAGFC NINELFEAHG EVAERIDVVK GPASALYGSN AIHGVINVIT PDTTQGTGQL ALDYGSYGFH RAKLQQGKDF GSSGVGIAAS LTRDTGYRND EGVDQEKVSL RHRIEWDSTV ITSGLTYTHL DQETAGYIEG FESYKSTELA RSNPNPEAFR NAKSLRIWSK FNTSFDGGHG LSITPYLRNQ DMRFRMHFLP GKPLEENAQK GVGVLSQFNY IVNDYVSLDL GIDAEYTEGE LVQSQQGATE GSAFLVETIP SGKHYDYDVD AALIAPFFAL NWQHEKWDVS FGGRFESMQY DYTNNMNVGR VREDGTQCGF GGCRYSRPAD SSNDFDSFSP KLSLRYQLSG STQLFGGLAR GYRAPQATEL YRLQRAQEVT DLDSVTADNI EVGITGTTDR GSYTLSFYSL EKDNVIYRDS NFFNVSNGET WHRGVELSFN QKISDVLRVD FAGTYARHTY EHSQITGELD IKGNDMDTAP KVQLNTRLNY DVTRNIQAQI EWQHVASYYT DAENLNEYDG HDLVHARVRF NVNNDITLHA RINNVFDTKY AERADFTSFT GPRYFPGRPR NFMLSATFAL
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