Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03804 |
Symbol | |
ID | 6779100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 4105291 |
End bp | 4106871 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642757255 |
Product | putative cytochrome d ubiquinol oxidase, subunit I |
Protein accession | YP_002128088 |
Protein GI | 196158599 |
COG category | [C] Energy production and conversion |
COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATA CGTTAATAGA ACTATCGCGG TGGCAATTTG CATTAACTGC GATGTTCCAC TTTATTTTTG TACCCTTAAC ACTAGGGCTA AGCTTTCTAC TTGCCATTAT GGAGTCAGTT TATGTAATGA CAGGTAAAGA GATATACAAG CAAATGACCC AGTTTTGGGG AAAGCTGTTT GGTATTAACT TTGCTATTGG CGTAGCCACA GGCTTAACCA TGGAATTCCA GTTCGGCATG AACTGGTCAT ACTATTCCCA CTATGTCGGC GATATCTTTG GCGCGCCTCT GGCTATTGAA GGGCTGATGG CCTTCTTCTT GGAGTCTACC TTCGTGGGCC TGTTCTTTTT TGGCTGGGAC AAAATGTCTA AGGTGAAGCA CCTTATGGCT ACTTGGTTAG TTGCCATTGG TTCTAACTTC TCAGCGCTTT GGATCCTAAT CGCTAATGGC TGGATGCAGT ACCCGGTAGG CGCTGAATTC AACTTTGAAG CTATGCGTAT GGAAATGACC AGCTTCGCAG ACGTTATTTT TAATCCGGTA GCACAGGTTA AGTTCGTTCA TACGGTTTCA GCAGGCTACG TGACCGGTGC CATGTTTGTA TTGGCAATTT CTAGCTACTA TCTACTGAAT CACAAGCATA TTGCGTTTGC CCGTCGTTCG TTTGCGATTG CAGCTAGCTT TGGCTTAGCG GCTACCTTGT CAGTTATTGT TTTAGGTGAT GAAAGTGGCT ATGAACTAGG TGACGTGCAA AAAGTGAAAT TAGCTGCAGT TGAAGCTGAA TATGAGACGC ATCCCGCGCC AGCACCGTTC ACTGTTTTTG GTATACCTAA CGATGAAAAA GAAAAAACCG AATACGCCCT TCAAATTCCC TGGGCAATGG GCATTATCGC AACACGCTCG TTAACCGAAG AAGTGAAAGG TATTAAGGAT CTTAAAGAAG AGAATCGCGA GCGTATTTTA AGCGGCATCA AAGCTTATGA AGTGCTTGAT GACGTAAGAA ATGGTACCGC AACGGCTGAG CAGCGCGCCG CATTTGAAGC CAACAAAGAC AGTCTTGGTT ATGCAATGCT GCTTGAACCC TATACTGACG ATGTTTCAAA CCCATCAGAA ACGGCAATTC AACAAGCTGT TGATTATAGC ATTCCACCGG TGGCCCCGCT ATTTTGGAGC TTCCGCATCA TGGTTGCTGC AGGTTTTATT ATGCTTGCAT TGTTCTTGTG TGCTTTTTAC TACAGCACAA AACACAAAAT CACCAAGCCT CGCTGGCTAT TAAAAGGTGC ACTGTATGGC CTACCACTTC CATGGGTTGC GTGTGAAGCA GGCTGGTTCG TTGCTGAGTA TGGTCGTCAA CCATGGTCTA TCGCAGAAGT ATTGCCAGTG CATACCTCGG TGTCTAACTT GGCAATTAGT GACGTGGTAA TCACCATTAT AGCCTACACC GTTTTCTACA CAGCGATGTT CATCATTGGC TTCTATCTAA TGAAGAAATT CGCGAAGAAA GGTCCCGTTC CACCGGAAGA TAAAACGACT GAAACCGAAC TTGATCTTAT TGACCTTGAT GAGCAAGGAG CAAAAGCATG A
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Protein sequence | MSDTLIELSR WQFALTAMFH FIFVPLTLGL SFLLAIMESV YVMTGKEIYK QMTQFWGKLF GINFAIGVAT GLTMEFQFGM NWSYYSHYVG DIFGAPLAIE GLMAFFLEST FVGLFFFGWD KMSKVKHLMA TWLVAIGSNF SALWILIANG WMQYPVGAEF NFEAMRMEMT SFADVIFNPV AQVKFVHTVS AGYVTGAMFV LAISSYYLLN HKHIAFARRS FAIAASFGLA ATLSVIVLGD ESGYELGDVQ KVKLAAVEAE YETHPAPAPF TVFGIPNDEK EKTEYALQIP WAMGIIATRS LTEEVKGIKD LKEENRERIL SGIKAYEVLD DVRNGTATAE QRAAFEANKD SLGYAMLLEP YTDDVSNPSE TAIQQAVDYS IPPVAPLFWS FRIMVAAGFI MLALFLCAFY YSTKHKITKP RWLLKGALYG LPLPWVACEA GWFVAEYGRQ PWSIAEVLPV HTSVSNLAIS DVVITIIAYT VFYTAMFIIG FYLMKKFAKK GPVPPEDKTT ETELDLIDLD EQGAKA
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