Gene MADE_03804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03804 
Symbol 
ID6779100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4105291 
End bp4106871 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content45% 
IMG OID642757255 
Productputative cytochrome d ubiquinol oxidase, subunit I 
Protein accessionYP_002128088 
Protein GI196158599 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA CGTTAATAGA ACTATCGCGG TGGCAATTTG CATTAACTGC GATGTTCCAC 
TTTATTTTTG TACCCTTAAC ACTAGGGCTA AGCTTTCTAC TTGCCATTAT GGAGTCAGTT
TATGTAATGA CAGGTAAAGA GATATACAAG CAAATGACCC AGTTTTGGGG AAAGCTGTTT
GGTATTAACT TTGCTATTGG CGTAGCCACA GGCTTAACCA TGGAATTCCA GTTCGGCATG
AACTGGTCAT ACTATTCCCA CTATGTCGGC GATATCTTTG GCGCGCCTCT GGCTATTGAA
GGGCTGATGG CCTTCTTCTT GGAGTCTACC TTCGTGGGCC TGTTCTTTTT TGGCTGGGAC
AAAATGTCTA AGGTGAAGCA CCTTATGGCT ACTTGGTTAG TTGCCATTGG TTCTAACTTC
TCAGCGCTTT GGATCCTAAT CGCTAATGGC TGGATGCAGT ACCCGGTAGG CGCTGAATTC
AACTTTGAAG CTATGCGTAT GGAAATGACC AGCTTCGCAG ACGTTATTTT TAATCCGGTA
GCACAGGTTA AGTTCGTTCA TACGGTTTCA GCAGGCTACG TGACCGGTGC CATGTTTGTA
TTGGCAATTT CTAGCTACTA TCTACTGAAT CACAAGCATA TTGCGTTTGC CCGTCGTTCG
TTTGCGATTG CAGCTAGCTT TGGCTTAGCG GCTACCTTGT CAGTTATTGT TTTAGGTGAT
GAAAGTGGCT ATGAACTAGG TGACGTGCAA AAAGTGAAAT TAGCTGCAGT TGAAGCTGAA
TATGAGACGC ATCCCGCGCC AGCACCGTTC ACTGTTTTTG GTATACCTAA CGATGAAAAA
GAAAAAACCG AATACGCCCT TCAAATTCCC TGGGCAATGG GCATTATCGC AACACGCTCG
TTAACCGAAG AAGTGAAAGG TATTAAGGAT CTTAAAGAAG AGAATCGCGA GCGTATTTTA
AGCGGCATCA AAGCTTATGA AGTGCTTGAT GACGTAAGAA ATGGTACCGC AACGGCTGAG
CAGCGCGCCG CATTTGAAGC CAACAAAGAC AGTCTTGGTT ATGCAATGCT GCTTGAACCC
TATACTGACG ATGTTTCAAA CCCATCAGAA ACGGCAATTC AACAAGCTGT TGATTATAGC
ATTCCACCGG TGGCCCCGCT ATTTTGGAGC TTCCGCATCA TGGTTGCTGC AGGTTTTATT
ATGCTTGCAT TGTTCTTGTG TGCTTTTTAC TACAGCACAA AACACAAAAT CACCAAGCCT
CGCTGGCTAT TAAAAGGTGC ACTGTATGGC CTACCACTTC CATGGGTTGC GTGTGAAGCA
GGCTGGTTCG TTGCTGAGTA TGGTCGTCAA CCATGGTCTA TCGCAGAAGT ATTGCCAGTG
CATACCTCGG TGTCTAACTT GGCAATTAGT GACGTGGTAA TCACCATTAT AGCCTACACC
GTTTTCTACA CAGCGATGTT CATCATTGGC TTCTATCTAA TGAAGAAATT CGCGAAGAAA
GGTCCCGTTC CACCGGAAGA TAAAACGACT GAAACCGAAC TTGATCTTAT TGACCTTGAT
GAGCAAGGAG CAAAAGCATG A
 
Protein sequence
MSDTLIELSR WQFALTAMFH FIFVPLTLGL SFLLAIMESV YVMTGKEIYK QMTQFWGKLF 
GINFAIGVAT GLTMEFQFGM NWSYYSHYVG DIFGAPLAIE GLMAFFLEST FVGLFFFGWD
KMSKVKHLMA TWLVAIGSNF SALWILIANG WMQYPVGAEF NFEAMRMEMT SFADVIFNPV
AQVKFVHTVS AGYVTGAMFV LAISSYYLLN HKHIAFARRS FAIAASFGLA ATLSVIVLGD
ESGYELGDVQ KVKLAAVEAE YETHPAPAPF TVFGIPNDEK EKTEYALQIP WAMGIIATRS
LTEEVKGIKD LKEENRERIL SGIKAYEVLD DVRNGTATAE QRAAFEANKD SLGYAMLLEP
YTDDVSNPSE TAIQQAVDYS IPPVAPLFWS FRIMVAAGFI MLALFLCAFY YSTKHKITKP
RWLLKGALYG LPLPWVACEA GWFVAEYGRQ PWSIAEVLPV HTSVSNLAIS DVVITIIAYT
VFYTAMFIIG FYLMKKFAKK GPVPPEDKTT ETELDLIDLD EQGAKA