| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03803 |
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| Symbol | |
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| ID | 6779059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4104158 |
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| End bp | 4105294 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642757254 |
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| Product | Cytochrome D ubiquinol oxidase subunit II (Cytochrome BD-I oxidase subunit II) |
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| Protein accession | YP_002128087 |
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| Protein GI | 196158598 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGATT ATGAACTGCT AAGAGTCATT TGGTGGTGCT TAGTTGGCGT ACTGCTAATT
GGGTTCGCCG TCACTGACGG CTTCGATTTA GGGGTGGGCG CACTGCTTAC CCTCATCGGA
AAAAATGACA AAGAACGTCG CGTGATGATT AACACCGTCG GGCCTCACTG GGACGGAAAC
CAAGTGTGGT TTATTACGGC TGGTGGCGCC ATTTTTGCGG CGTGGCCAAT GATTTATGCT
ACCGCGTTTT CAGGTTTTTA CCTTGCTTTA GCATTGACGT TAATTGCTCT ATGGATGCGT
CCTATTGGTT TTGATTACCG CAGTAAACTG CCAAACCCAC AGTGGCGCAA AGCGTGGGAC
TGGGCGTTGT TTGCTGGTGG CATCATTCCT TCGCTCATAT TTGGTGTGGC GTTCGGTAAC
CTGCTGCTAG GTGTGCCCTT TGAATTAGAT AACACGCTTA AGTCAACGTA TACCGGGTCA
TTCTTTGGTC TTTTAACACC GTTTGCTTTA GTGAGTGGCC TACTTTCAGT CGCTATATTG
CTAAACCACG GTGCAACCTG GCTACAAATG AAAACCGATG GCTTTATTGA AGTTAGAGCC
CGCGCCGTGT CAGTAATATT AAGTCTGGTA GGCGTTGCAT TGTTTGTCAT TGCAGGTTTT
TGGGTAGCAT TTGGTTTAGA TGGCTTTGTC ATCACCTCAT CAATTGACAC CATTGCTACA
TCGAACCCGC TTAAGAAAGA GGTAGCTATT GAAGCGGGCG CTTGGATGAG CAATTACAGC
AAATATCCTT TCATGGTGAT AGCACCTGTA TTAGGTGTAG TAGCTGGCCT TGCCTGCGCG
TTCTTCTCTA AGAAGGGAAA TGCAGGTATG GCGTTTGTGT CAAGCGCACT ATTTATCACA
GGCGTAATTT TAACAGCGGG CTTCTCAATG TTCCCGTTCT TAATGCCAAG TATCACCATG
CCAGAAGCTA GCCTTACGGT ATGGGATGCA ACGTCTAGCC ATATGACGCT AAACGTTATG
TTCATCGTTG CCTGTATCTT TGTGCCTATT GTACTGAGCT ACACTGCCTA TAGTTTTTAT
GTGATGCGCG GTCGTATCAA AAACGACGAC CTCGACCAAT CTCACACTAT CTATTAA
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| Protein sequence | MIDYELLRVI WWCLVGVLLI GFAVTDGFDL GVGALLTLIG KNDKERRVMI NTVGPHWDGN
QVWFITAGGA IFAAWPMIYA TAFSGFYLAL ALTLIALWMR PIGFDYRSKL PNPQWRKAWD
WALFAGGIIP SLIFGVAFGN LLLGVPFELD NTLKSTYTGS FFGLLTPFAL VSGLLSVAIL
LNHGATWLQM KTDGFIEVRA RAVSVILSLV GVALFVIAGF WVAFGLDGFV ITSSIDTIAT
SNPLKKEVAI EAGAWMSNYS KYPFMVIAPV LGVVAGLACA FFSKKGNAGM AFVSSALFIT
GVILTAGFSM FPFLMPSITM PEASLTVWDA TSSHMTLNVM FIVACIFVPI VLSYTAYSFY
VMRGRIKNDD LDQSHTIY
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