| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03732 |
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| Symbol | |
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| ID | 6778284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 4031322 |
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| End bp | 4032296 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642757185 |
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| Product | Geranylgeranyl pyrophosphate synthase |
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| Protein accession | YP_002128018 |
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| Protein GI | 196158529 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.100816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATAG ACCAAATCCG CGCCCTGTCT AATGATGATA TGCAGGCGGT TAATCAGCTG
ATTCAACAAC AAGTCGACTC TGAAGTAGCC CTTATTAATC AGCTTGGTTT TTACATCGTA
AACAGCGGCG GCAAACGCTT ACGCCCACTT CTTACCGTAT TAAGCGCTCG AGCCATGGGC
ATTGATAACA ACGAACATCA CACCTTAGCG GCGATAGTAG AGTTTATTCA CACTGCCACG
CTACTTCACG ATGACGTAGT GGACGAGTCA ACCATGCGCC GCGGCCGTGA AACCGCTAAC
GCGATTTTTG GTAATCAAGC ATCGGTACTG GTAGGCGACT TTTTATATAC TCGTTCTTTC
CAAATGATGG TAAGTCTTAA ACGCATGCGC GTTATGGAAA TATTATCGGA AGCCACAAAT
CAAATTGCTG AAGGTGAAGT ATTACAGTTG ATGAACTGTA ACGATGCCGG CACTACCGAA
GCCCGTTATT TTGATGTTAT TTACGGAAAA ACTGCTCGAT TATTTGAGGC CGCAACACAA
TTAGCCGCAG TACTTACCGA GCAAAACGAG CACATTGAGC GTGCGATGCA AGAGTACGGC
AAGCATTTAG GTACAGCCTT TCAATTAGCC GATGATATTC TTGACTACAT GGCTGATAGT
GAAGAAATGG GTAAAAATGC TGGCGACGAC TTAGCAGAGG GTAAACCTAC CCTTCCGCTG
CTTTACGCCA TGTGGCACGC TACGAATGAT AGCGACAAAG CACTTATTCA AGAAGCGATT
GAGCAAAGCA ATGGCCTACC ACATTTGACG CGAATTCAAG GCATCATGGA AGAAACCGGC
GCATTAGACT ACACACGCCA ATGTGCGCAA AAGGAAGTGC AGATGGCCAT TGATAGCTTA
AGCGCTATTG AAGACTCTAA ATACAAAGAA GCGCTGATTG CGCTGGCGCA TATTTCAATT
GAGCGTACAA GCTAG
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| Protein sequence | MDIDQIRALS NDDMQAVNQL IQQQVDSEVA LINQLGFYIV NSGGKRLRPL LTVLSARAMG
IDNNEHHTLA AIVEFIHTAT LLHDDVVDES TMRRGRETAN AIFGNQASVL VGDFLYTRSF
QMMVSLKRMR VMEILSEATN QIAEGEVLQL MNCNDAGTTE ARYFDVIYGK TARLFEAATQ
LAAVLTEQNE HIERAMQEYG KHLGTAFQLA DDILDYMADS EEMGKNAGDD LAEGKPTLPL
LYAMWHATND SDKALIQEAI EQSNGLPHLT RIQGIMEETG ALDYTRQCAQ KEVQMAIDSL
SAIEDSKYKE ALIALAHISI ERTS
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