Gene MADE_03722 details

Gene Information

• Locus tag: MADE_03722
• Symbol: ispF
• ID: 6778154
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 4022936
• End bp: 4023409
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 642757175
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_002128008
• Protein GI: 196158519
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0803938
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAATTG GACACGGTTT TGATGTACAC AAATTTGGCG GCGAAGGCCC CATCACCATA 
GGTGGCGTGA GCATTGATTA CGAACAAGGT TTAGTTGCCC ATTCAGATGG CGACGTATTG 
CTTCACGCAC TATGCGATGC AATGTTAGGC GCTGCTGCGC TAGGCGATAT TGGTAAACAC 
TTCCCCGATA CTGACGATGC CTATGCAGGC GCCGATAGTC GCGTATTGTT GCGCCACGTC 
GTGAGCGTGG TAGAAGAAAA AGGCTATAAA CTTGGCAACG CTGACATGAC TATTGTAGCG 
CAAGCACCTA AGATGGCACC GCACATAACC GCTATGCGAG AGGTTATCGC TAAAGACTGT 
AACGTGAACC TTGATGCAAT AAACGTGAAA GCCACAACCA CCGAAAAGCT AGGATACACA 
GGGCGCAAAG AAGGCATTGC CTCTCACGCC GTCGTACTAT TGGAAAAACT ATGA 

 

Protein sequence

MRIGHGFDVH KFGGEGPITI GGVSIDYEQG LVAHSDGDVL LHALCDAMLG AAALGDIGKH 
FPDTDDAYAG ADSRVLLRHV VSVVEEKGYK LGNADMTIVA QAPKMAPHIT AMREVIAKDC 
NVNLDAINVK ATTTEKLGYT GRKEGIASHA VVLLEKL