Gene MADE_03697 details

Gene Information

• Locus tag: MADE_03697
• ID: 6777891
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: -
• Start bp: 3992159
• End bp: 3994186
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 642757150
• Product: ABC-type sugar transport system, periplasmic component
• Protein accession: YP_002127983
• Protein GI: 196158494
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1653] ABC-type sugar transport system, periplasmic component

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTACATT TAGCGACTGC AGCTCGCTGG CTATTTGTCA CTGCCCTCAT TATTAGCGAG 
CTGGCCTATG CGCGTCCTAT CGTGCTTGCA ACCTCGGAAG TTAGTCCCTT TAGTGACAGC 
AAAGACGTGT CGAAAGGATA CGTAAATGAA GAGGTGGTAA AAGCTTTTGA AGAACTAGAT 
GAGCAGCTTA ACGTTGAGCG TTATCCTCAT GCTAGGGCTC TGATGTTGGC GAAGAAGGGA 
ACCGTCGATG GCGTATTTCC TGTTCACCAT CATGAGCGCT TCACAGACGC ATTTCTTTTA 
TCTGATGCCA TCCCTGCAGG AGCAAGTGGG TTCCTAATTA GGACGAAAGA CTTCAAGGAT 
AACAGTAGCC CCGACAACCT TGTTGAATGG CTTAAACGAC AAAATTTACG AGGAATCGGG 
TATCTGAGGG GGACGACAGC CCCCAAATTC TTATCAAAAG AAACGTTTTT CAACCTGTAT 
CCGGGTGCAT CTACCGTTAA CCTATTGGAT TTACTTGGTA AAGGGCGAAT TGATGTACTG 
TTTATTGATA AATACAGCGC AAAGGAGGCG TTAGTAAATG AACGGCCCAA TTTAATTGGG 
AAGTTTAATT TTATCCCTGG TGCGGAGGTA GCTAGCACTT ATCATCTCGC ACTGTCTAAG 
CAGACACCTG GAGCCTCTCA GTTAATTGAA AAATTTAACT TAGCGTTACA GAAACAAAAA 
CAAAGCAGAT TATTAACGCT CACACTCGAG AAATATGGCG TCTATGACGC TTCACAGGGG 
GAAGAGGCAT TAGTTGTCGG GGCGCCAGAT ATTAATGCCG TTTTTCAAGC TAAAGCATAC 
TTAGATAAAC ACGATTCGCC TTTGCTGCAC TCCAATATTC AATGGCGAAT AATGGATGAA 
ACCGTTTTGC GCCGTAGACT GCTAGGTGAC TTTTCTGTTA ACGAAAACAG CTTCGACTTG 
GTGTTAATCG GCAGCTATGG TCTTCCCATA TGGGCTAAAC GAGGCGTTCT ACTTCCTTTC 
AAATCGCATC CCGCCGATTA CGATATCGAC GACATTATTC CTGCCGCTCT GCATGCAAAC 
ATTGTAGATG GACAGCTTTA TGGATTGCCT TTTGTCGCTG AAACTACGCT TACTTTTTAC 
CGAAAAGATC TGCTAGAAAA GTTTAGTTTA AGTCTACCCA CCGTACTCAC CTATAACGAT 
ATTAAGTCTC TTGCTAAACA AGTACATATA CCTGAAAAAG AAGTCTATGG TATAGGGCTT 
AGAACGCGAG TGGGCTGGGG ACAGAATATG GCATTAGTGA GCACCATGGC TAACACCTAT 
GGCGGGGCGT GGTTAGACAA CAACATGCAG CCCACACTGG ATAGTAAGGC ATGGTTTGAT 
GCAGTCGGTA TGTATGCTGA ACTTGTTAGG CAATATGGGC CGCCTGATAA TCATGATATG 
GGGTGGCAAG AGAATCAAGA GCTCTTTGCC CAAGGGAAAT TAGCCTTTTT CGTTGACGCT 
TCTTCATTAG GCGGGGCTTT ATTTGATGAT CACTTTTCTA AAGTGACTCA ATTTACCGGA 
GTAACCTATG CGCCGCTGGG TAAGCAACAG AAAGGGGCGC AATGGTTTTG GTCATGGAAT 
TTTGCAATAC CGAAACAATC TCGCTATGTA GAAGAGGCCC AGCTACTTGC GCATTTTTTA 
ACGTCTAAAA TCTTTATTAA TTTACTTAAG AAAGCCCGCG GAGAATACGC GGCCCCGTCT 
GGTACTCGAC ACTCAACATA TTCTAGCGAT TATCTGCAAG CCGTACCTTA TGCGGCTTTT 
GAACATCAAG CATTGAAGTT ACTTTCAAGC GATAAACCAG GTAATGCCAT GGTAGGCAAA 
CAGTTTATCC CTATCCCAGA ATTTACCGCT ATCGGTTACG CCGTAGGGGC ACAAATTAAT 
GATGTGGTTA CTGGGGGAAA AAGCGTAAAA GCGGCGCTAG AAGGAGCGCA AAGCCAGACT 
CAGATTATTT TGGAACGGGC AGGGTACTTC GCTGATAAAG AAGAATAG 

 

Protein sequence

MLHLATAARW LFVTALIISE LAYARPIVLA TSEVSPFSDS KDVSKGYVNE EVVKAFEELD 
EQLNVERYPH ARALMLAKKG TVDGVFPVHH HERFTDAFLL SDAIPAGASG FLIRTKDFKD 
NSSPDNLVEW LKRQNLRGIG YLRGTTAPKF LSKETFFNLY PGASTVNLLD LLGKGRIDVL 
FIDKYSAKEA LVNERPNLIG KFNFIPGAEV ASTYHLALSK QTPGASQLIE KFNLALQKQK 
QSRLLTLTLE KYGVYDASQG EEALVVGAPD INAVFQAKAY LDKHDSPLLH SNIQWRIMDE 
TVLRRRLLGD FSVNENSFDL VLIGSYGLPI WAKRGVLLPF KSHPADYDID DIIPAALHAN 
IVDGQLYGLP FVAETTLTFY RKDLLEKFSL SLPTVLTYND IKSLAKQVHI PEKEVYGIGL 
RTRVGWGQNM ALVSTMANTY GGAWLDNNMQ PTLDSKAWFD AVGMYAELVR QYGPPDNHDM 
GWQENQELFA QGKLAFFVDA SSLGGALFDD HFSKVTQFTG VTYAPLGKQQ KGAQWFWSWN 
FAIPKQSRYV EEAQLLAHFL TSKIFINLLK KARGEYAAPS GTRHSTYSSD YLQAVPYAAF 
EHQALKLLSS DKPGNAMVGK QFIPIPEFTA IGYAVGAQIN DVVTGGKSVK AALEGAQSQT 
QIILERAGYF ADKEE