Gene MADE_03693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03693 
Symbol 
ID6777858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3985947 
End bp3987716 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content48% 
IMG OID642757146 
ProductATP-dependent RNA helicase 
Protein accessionYP_002127979 
Protein GI196158490 
COG category[L] Replication, recombination and repair
[J] Translation, ribosomal structure and biogenesis
[K] Transcription 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAA CTGTCGACAT GACATTTAAA GACCTCAATT TACCAGAACC AATCTTACAA 
GCCCTTGAAA AAGTTGGCTA CGAGAAACCG TCTCCTATTC AAGCTGAGAG TATTCCTCTT
TTACTTGAAG GACACGACTT ACTCGGTCAG GCACAGACAG GGACAGGAAA AACCGCTGCG
TTTGCCCTGC CCATGTTGGC AAATATCGAT CCTGAGCAAC GTAAGCCGCA ATTACTGGTA
TTGGCCCCAA CCCGTGAATT AGCAATTCAG GTTGCAGAGG CGTTTCAGGT TTATGCGAGC
TTTAGTCAAA AAATTAAAGT ACTTCCCGTA TACGGCGGCC AGTCGTACGA CAACCAAATT
CGCCAGCTTA AGCGCGGCGT GCAAGTGGTT GTTGGTACAC CAGGGCGTAT CATCGACCAT
ATCAAGCGCA AAACACTAGA CTTAAGCGAA CTTAAGTATT TAGTGCTAGA TGAAGCAGAT
GAAATGCTTC GCATGGGCTT TATCGATGAC GTTGAGCTTA TTCTTAGCCA CGCGCCAGAA
GAGCGCCAAA CTGCGCTGTT CTCGGCAACC ATGCCTGGCC CAATCAAGAA GATTACCCAG
CGCTATTTGA AAGATCCTAA GCACGTCAAA ATTGCGTCTA AGGTAAGCAC TGCCAGCACC
ATTCGCCAGC GTTACTGCCA AATCGCACCG CACCACAAAC TTGAAGCGCT AACCCGCATC
ATGGAAGTGG AAGTGTTCGA CGGTATGATT ATTTTCGTAC GCACGAAAAC CGCTACCGTG
GAACTTGCCG ATAAGCTATC TGCCCGTGGT TACGATGTAG AACCACTAAA CGGTGATATT
CCTCAGGCAG CCCGTGAGCG TACTGTTGAA AAGCTTAAAC AGGGTAAAAT CGACATTCTT
GTAGCTACTG ACGTAGTAGC CCGAGGTCTT GACGTTGAGC GTGTAAGCCA CGTTATCAAC
TACGATATCC CGTATGACAG TGAGTCTTAC GTACACCGTA TTGGTCGTAC CGGTCGTGCT
GGTCGTCAAG GTGATGCAAT CCTATTTATT TCTCACCGCG AAAAGCGCTT GTTGTTCTCT
ATCGAGAAAA CCACTAAACA GCCTATTGAA GCGATGCCTA TTCCTTCAAT CAGCGAAATC
AATGAGACAC GCTTAAGCCG TTTCAAACAG TCGGTTGCCG AAGCAACGCA AGACGATAGC
ATTGAATCAT TAATGCCTAT TGTTGAGATG ATTAAAGAAG AAAACGAAGC ATCGCCTGAA
ACCATCATGG CTGCGCTACT TAAAATTGCG CAAGGCGACG AGCCGTTAAT TCTTAAAGAA
TCAGATCGAC CAGACATCAA CAGCAAGCCT CCACGCGATA ATCGTGATAG AAACTCTCGC
GATGGTCGTG ATGGCCGCGA AAGAAAGCCA AGAGTACCAC GTGGTAACCG CAAGCCAGAA
GAAGGCATGC AGCGCTTCCG TATTGAAGTA GGTCATGTTC ACGGCGCTAA GCCTGGCAAC
ATCGTTGGCG CTATTGCGAA CGAAGCAAAC ATAAACTCGA AGCACATTGG CGCTATCGAG
ATTTATGATA ACTTCAGTAC TGTTGATTTA CCTGACGGTA TGCCAAAAGA AACCCGTGAC
ACCCTTTCGG GCACACGCGT AGCAGGTCAG CGATTGAACA TTCGTGAATG GTCAGACACG
CCACCTAAGC GCGACGGTCG TGGAAGCCGC GGTGACAAAG GTGATCGTGC ACCTAGAGGC
AACCGTGAAA ACCGTAAACG TAAGAACTAA
 
Protein sequence
MTTTVDMTFK DLNLPEPILQ ALEKVGYEKP SPIQAESIPL LLEGHDLLGQ AQTGTGKTAA 
FALPMLANID PEQRKPQLLV LAPTRELAIQ VAEAFQVYAS FSQKIKVLPV YGGQSYDNQI
RQLKRGVQVV VGTPGRIIDH IKRKTLDLSE LKYLVLDEAD EMLRMGFIDD VELILSHAPE
ERQTALFSAT MPGPIKKITQ RYLKDPKHVK IASKVSTAST IRQRYCQIAP HHKLEALTRI
MEVEVFDGMI IFVRTKTATV ELADKLSARG YDVEPLNGDI PQAARERTVE KLKQGKIDIL
VATDVVARGL DVERVSHVIN YDIPYDSESY VHRIGRTGRA GRQGDAILFI SHREKRLLFS
IEKTTKQPIE AMPIPSISEI NETRLSRFKQ SVAEATQDDS IESLMPIVEM IKEENEASPE
TIMAALLKIA QGDEPLILKE SDRPDINSKP PRDNRDRNSR DGRDGRERKP RVPRGNRKPE
EGMQRFRIEV GHVHGAKPGN IVGAIANEAN INSKHIGAIE IYDNFSTVDL PDGMPKETRD
TLSGTRVAGQ RLNIREWSDT PPKRDGRGSR GDKGDRAPRG NRENRKRKN