Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03693 |
Symbol | |
ID | 6777858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3985947 |
End bp | 3987716 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642757146 |
Product | ATP-dependent RNA helicase |
Protein accession | YP_002127979 |
Protein GI | 196158490 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACAA CTGTCGACAT GACATTTAAA GACCTCAATT TACCAGAACC AATCTTACAA GCCCTTGAAA AAGTTGGCTA CGAGAAACCG TCTCCTATTC AAGCTGAGAG TATTCCTCTT TTACTTGAAG GACACGACTT ACTCGGTCAG GCACAGACAG GGACAGGAAA AACCGCTGCG TTTGCCCTGC CCATGTTGGC AAATATCGAT CCTGAGCAAC GTAAGCCGCA ATTACTGGTA TTGGCCCCAA CCCGTGAATT AGCAATTCAG GTTGCAGAGG CGTTTCAGGT TTATGCGAGC TTTAGTCAAA AAATTAAAGT ACTTCCCGTA TACGGCGGCC AGTCGTACGA CAACCAAATT CGCCAGCTTA AGCGCGGCGT GCAAGTGGTT GTTGGTACAC CAGGGCGTAT CATCGACCAT ATCAAGCGCA AAACACTAGA CTTAAGCGAA CTTAAGTATT TAGTGCTAGA TGAAGCAGAT GAAATGCTTC GCATGGGCTT TATCGATGAC GTTGAGCTTA TTCTTAGCCA CGCGCCAGAA GAGCGCCAAA CTGCGCTGTT CTCGGCAACC ATGCCTGGCC CAATCAAGAA GATTACCCAG CGCTATTTGA AAGATCCTAA GCACGTCAAA ATTGCGTCTA AGGTAAGCAC TGCCAGCACC ATTCGCCAGC GTTACTGCCA AATCGCACCG CACCACAAAC TTGAAGCGCT AACCCGCATC ATGGAAGTGG AAGTGTTCGA CGGTATGATT ATTTTCGTAC GCACGAAAAC CGCTACCGTG GAACTTGCCG ATAAGCTATC TGCCCGTGGT TACGATGTAG AACCACTAAA CGGTGATATT CCTCAGGCAG CCCGTGAGCG TACTGTTGAA AAGCTTAAAC AGGGTAAAAT CGACATTCTT GTAGCTACTG ACGTAGTAGC CCGAGGTCTT GACGTTGAGC GTGTAAGCCA CGTTATCAAC TACGATATCC CGTATGACAG TGAGTCTTAC GTACACCGTA TTGGTCGTAC CGGTCGTGCT GGTCGTCAAG GTGATGCAAT CCTATTTATT TCTCACCGCG AAAAGCGCTT GTTGTTCTCT ATCGAGAAAA CCACTAAACA GCCTATTGAA GCGATGCCTA TTCCTTCAAT CAGCGAAATC AATGAGACAC GCTTAAGCCG TTTCAAACAG TCGGTTGCCG AAGCAACGCA AGACGATAGC ATTGAATCAT TAATGCCTAT TGTTGAGATG ATTAAAGAAG AAAACGAAGC ATCGCCTGAA ACCATCATGG CTGCGCTACT TAAAATTGCG CAAGGCGACG AGCCGTTAAT TCTTAAAGAA TCAGATCGAC CAGACATCAA CAGCAAGCCT CCACGCGATA ATCGTGATAG AAACTCTCGC GATGGTCGTG ATGGCCGCGA AAGAAAGCCA AGAGTACCAC GTGGTAACCG CAAGCCAGAA GAAGGCATGC AGCGCTTCCG TATTGAAGTA GGTCATGTTC ACGGCGCTAA GCCTGGCAAC ATCGTTGGCG CTATTGCGAA CGAAGCAAAC ATAAACTCGA AGCACATTGG CGCTATCGAG ATTTATGATA ACTTCAGTAC TGTTGATTTA CCTGACGGTA TGCCAAAAGA AACCCGTGAC ACCCTTTCGG GCACACGCGT AGCAGGTCAG CGATTGAACA TTCGTGAATG GTCAGACACG CCACCTAAGC GCGACGGTCG TGGAAGCCGC GGTGACAAAG GTGATCGTGC ACCTAGAGGC AACCGTGAAA ACCGTAAACG TAAGAACTAA
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Protein sequence | MTTTVDMTFK DLNLPEPILQ ALEKVGYEKP SPIQAESIPL LLEGHDLLGQ AQTGTGKTAA FALPMLANID PEQRKPQLLV LAPTRELAIQ VAEAFQVYAS FSQKIKVLPV YGGQSYDNQI RQLKRGVQVV VGTPGRIIDH IKRKTLDLSE LKYLVLDEAD EMLRMGFIDD VELILSHAPE ERQTALFSAT MPGPIKKITQ RYLKDPKHVK IASKVSTAST IRQRYCQIAP HHKLEALTRI MEVEVFDGMI IFVRTKTATV ELADKLSARG YDVEPLNGDI PQAARERTVE KLKQGKIDIL VATDVVARGL DVERVSHVIN YDIPYDSESY VHRIGRTGRA GRQGDAILFI SHREKRLLFS IEKTTKQPIE AMPIPSISEI NETRLSRFKQ SVAEATQDDS IESLMPIVEM IKEENEASPE TIMAALLKIA QGDEPLILKE SDRPDINSKP PRDNRDRNSR DGRDGRERKP RVPRGNRKPE EGMQRFRIEV GHVHGAKPGN IVGAIANEAN INSKHIGAIE IYDNFSTVDL PDGMPKETRD TLSGTRVAGQ RLNIREWSDT PPKRDGRGSR GDKGDRAPRG NRENRKRKN
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